D. rerio Gene: zgc:171779 - ENSDARG00000016908 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016908
Namezgc:171779
Descriptionzgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
OrganismDanio rerio (zebrafish)
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
35.4
  • 35.4
  • 880
99.88
  • 99.88
  • 97.06
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
128
  • 128
99.57
  • 99.57
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
144
  • 144
99.52
  • 99.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
253
  • 253
99.16
  • 99.16
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
315
  • 315
98.95
  • 98.95
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
549
  • 549
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
2.56e3
  • 2.56e3
  • 4.64e3
  • 6.35e3
  • 8.01e3
  • 8.25e3
  • 9.48e3
91.43
  • 91.43
  • 84.46
  • 78.73
  • 73.19
  • 72.36
  • 68.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.88e3
  • 2.88e3
  • 3.93e3
90.37
  • 90.37
  • 86.84
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
3.36e3
  • 3.36e3
  • 3.38e3
  • 3.53e3
  • 3.63e3
  • 4.42e3
88.74
  • 88.74
  • 88.70
  • 88.17
  • 87.85
  • 85.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000066fully formed stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
3.48e3
  • 3.48e3
  • 5.49e3
  • 5.69e3
  • 6.86e3
  • 7.95e3
  • 8.02e3
  • 9.82e3
  • 1.13e4
  • 1.44e4
  • 1.49e4
  • 1.52e4
  • 1.65e4
  • 1.67e4
88.36
  • 88.36
  • 81.61
  • 80.94
  • 77.02
  • 73.38
  • 73.15
  • 67.10
  • 62.24
  • 51.82
  • 49.95
  • 49.01
  • 44.87
  • 44.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.74
  • 86.74
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.18e3
  • 4.18e3
86.00
  • 86.00
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.43
  • 84.43
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.23e3
  • 5.23e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.05
  • 80.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
79.95
  • 79.95
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.53e3
  • 7.53e3
74.79
  • 74.79
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.86e3
  • 8.86e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.67
  • 69.67
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.12e3
  • 9.12e3
69.47
  • 69.47
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.04e4
  • 1.04e4
  • 1.36e4
  • 1.67e4
  • 1.71e4
  • 2.19e4
  • 2.36e4
65.09
  • 65.09
  • 54.47
  • 44.23
  • 42.74
  • 26.70
  • 20.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.50e4
  • 1.50e4
  • 1.72e4
49.66
  • 49.66
  • 42.43
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
  • 2.01e4
43.32
  • 43.32
  • 32.69
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.79e4
  • 1.79e4
  • 2.07e4
39.99
  • 39.99
  • 30.84
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.86e4
  • 1.86e4
  • 2.11e4
37.84
  • 37.84
  • 29.20
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.26
  • 33.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.21
  • 26.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000016908.

Cross-references

EnsemblENSDARG00000016908 (zgc:171779)
ZFINZDB-GENE-071004-38 (zgc:171779)
EMBLBX324157
Uniprot/SPTREMBLF1QY35, F1QY35_DANRE

Do not show this banner again