Gene: ttyh2 - ENSDARG00000016934 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000016934
Name	ttyh2
Description	tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:92855

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	3.46e3 3.46e3	88.31562 88.31562	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	5.36e3 5.36e3	81.89471 81.89471	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5	5.54e3 5.54e3 7.16e3 8.44e3 1.00e4 1.47e4	81.28562 81.28562 75.81667 71.48700 66.09048 50.23974	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	5.95e3 5.95e3	79.88741 79.88741	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	7.98e3 7.98e3	73.02986 73.02986	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	9.22e3 9.22e3 1.63e4	68.83502 68.83502 44.90055	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000066fully formed stage UBERON:0000104life cycle	1.13e4 1.13e4 1.48e4	61.64345 61.64345 49.94254	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.22e4 1.22e4	58.90017 58.90017	AEIR AEIR
UBERON:0001017	central nervous system	[+] 7 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000032Pharyngula:High-pec ZFS:0000033Hatching:Long-pec ZFS:0000027Segmentation:20-25 somites ZFS:0000028Segmentation:26+ somites ZFS:0000030Pharyngula:Prim-15 ZFS:0000031Pharyngula:Prim-25	1.25e4 1.25e4 1.25e4 1.27e4 1.31e4 1.31e4 1.37e4 1.38e4	57.87109 57.87109 57.67708 57.12595 55.86038 55.86038 53.55284 53.31307	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.49e4 1.49e4	49.72707 49.72707	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.61e4 1.61e4	45.57653 45.57653	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.61e4 1.61e4	45.56467 45.56467	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.64e4 1.64e4	44.55579 44.55579	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.72e4 1.72e4	41.96617 41.96617	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.72e4 1.72e4	41.71328 41.71328	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.84e4 1.84e4	37.91425 37.91425	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.86e4 1.86e4	37.21461 37.21461	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.89e4 1.89e4	36.21753 36.21753	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Cross-references

EMBL	BX927300, BX936437, CABZ01041061, CABZ01093021, CABZ01093027
Ensembl	ENSDARG00000016934 (ttyh2)
Uniprot/SPTREMBL	E7F9S8, E7F9S8_DANRE, E9QEV5, E9QEV5_DANRE
ZFIN	ZDB-GENE-040718-193 (ttyh2)