D. rerio Gene: scamp2l - ENSDARG00000017010 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017010
Namescamp2l
Descriptionsecretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
OrganismDanio rerio (zebrafish)
Synonym(s)scamp2, wu:fj97b10, zgc:63465, zgc:63511
Orthologs(s)21 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
709
  • 709
  • 883
  • 1.56e3
  • 2.44e3
  • 6.46e3
97.63
  • 97.63
  • 97.05
  • 94.79
  • 91.82
  • 78.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
789
  • 789
  • 3.83e3
  • 4.35e3
  • 4.85e3
  • 5.12e3
  • 6.08e3
  • 7.10e3
  • 1.00e4
  • 1.17e4
  • 1.23e4
  • 1.28e4
  • 1.29e4
  • 1.32e4
  • 1.52e4
97.36
  • 97.36
  • 87.18
  • 85.43
  • 83.76
  • 82.87
  • 79.63
  • 76.24
  • 66.52
  • 60.92
  • 58.69
  • 57.29
  • 56.88
  • 55.82
  • 48.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
947
  • 947
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.23e3
  • 1.23e3
95.89
  • 95.89
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.44e3
  • 2.44e3
  • 2.77e3
91.85
  • 91.85
  • 90.72
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.08e3
  • 3.08e3
  • 5.43e3
  • 6.80e3
  • 7.25e3
  • 7.68e3
  • 9.89e3
89.70
  • 89.70
  • 81.83
  • 77.22
  • 75.73
  • 74.28
  • 66.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
87.45
  • 87.45
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.12e3
  • 4.12e3
86.22
  • 86.22
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.48
  • 79.48
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.93e3
  • 6.93e3
  • 7.18e3
  • 7.58e3
  • 8.07e3
  • 8.14e3
  • 8.23e3
  • 8.42e3
  • 9.04e3
  • 1.23e4
  • 1.63e4
76.81
  • 76.81
  • 75.97
  • 74.63
  • 72.97
  • 72.75
  • 72.44
  • 71.82
  • 69.73
  • 58.92
  • 45.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
72.61
  • 72.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.16e3
  • 9.16e3
69.32
  • 69.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.49e3
  • 9.49e3
68.24
  • 68.24
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.87e3
  • 9.87e3
  • 1.82e4
66.97
  • 66.97
  • 39.21
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.16
  • 66.16
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.06e4
  • 1.06e4
  • 1.22e4
  • 1.38e4
64.61
  • 64.61
  • 59.26
  • 53.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.11e4
  • 1.11e4
  • 1.46e4
62.68
  • 62.68
  • 50.96
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.16e4
  • 1.16e4
61.17
  • 61.17
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.32
  • 59.32
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.08
  • 56.08
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
  • 1.57e4
55.95
  • 55.95
  • 47.28
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.20
  • 48.20
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.63e4
  • 1.63e4
45.35
  • 45.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSDARG00000017010.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000017010.

Cross-references

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