D. rerio Gene: vaspb - ENSDARG00000017105 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017105
Namevaspb
Descriptionvasodilator-stimulated phosphoprotein b [Source:ZFIN;Acc:ZDB-GENE-030131-7118]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-202c21.1, si:dkey-113g17.1, vasp, wu:fb23b04, wu:fk84g05, zgc:110347
Orthologs(s)14 orthologs
Paralog(s)50 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
723
  • 723
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
882
  • 882
97.05
  • 97.05
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.55
  • 96.55
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
  • 1.99e3
96.52
  • 96.52
  • 93.33
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.44
  • 96.44
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.25e3
  • 1.25e3
  • 1.29e4
  • 1.31e4
  • 1.34e4
  • 1.34e4
  • 1.37e4
  • 1.39e4
95.81
  • 95.81
  • 56.79
  • 56.22
  • 54.97
  • 54.97
  • 54.13
  • 53.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
  • 3.28e3
95.75
  • 95.75
  • 89.02
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
1.29e3
  • 1.29e3
  • 1.39e3
  • 1.49e3
  • 1.71e3
  • 1.79e3
  • 1.99e3
  • 2.19e3
  • 2.90e3
  • 3.08e3
  • 3.24e3
95.70
  • 95.70
  • 95.35
  • 95.00
  • 94.29
  • 94.02
  • 93.35
  • 92.68
  • 90.28
  • 89.70
  • 89.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.36e3
  • 1.36e3
95.44
  • 95.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.40e3
  • 1.40e3
95.33
  • 95.33
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.38
  • 94.38
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000017Gastrula:50%-epiboly
2.05e3
  • 2.05e3
  • 2.21e3
  • 2.37e3
  • 2.42e3
  • 2.45e3
  • 2.93e3
  • 2.99e3
  • 3.63e3
  • 4.53e3
  • 4.62e3
  • 4.84e3
  • 4.96e3
  • 5.51e3
  • 6.04e3
  • 1.05e4
93.14
  • 93.14
  • 92.62
  • 92.06
  • 91.89
  • 91.82
  • 90.19
  • 90.00
  • 87.86
  • 84.84
  • 84.53
  • 83.78
  • 83.38
  • 81.55
  • 79.77
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
2.14e3
  • 2.14e3
  • 2.76e3
  • 3.25e3
92.84
  • 92.84
  • 90.75
  • 89.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.17e3
  • 2.17e3
92.73
  • 92.73
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.18e3
  • 2.18e3
  • 3.46e3
92.71
  • 92.71
  • 88.43
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.42
  • 89.42
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
3.24e3
  • 3.24e3
  • 3.33e3
  • 4.50e3
  • 4.58e3
  • 5.00e3
  • 5.01e3
89.15
  • 89.15
  • 88.87
  • 84.94
  • 84.66
  • 83.25
  • 83.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.41e3
  • 3.41e3
  • 6.43e3
  • 7.31e3
  • 1.05e4
88.60
  • 88.60
  • 78.48
  • 75.52
  • 64.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.22e3
  • 4.22e3
  • 1.01e4
85.89
  • 85.89
  • 66.19
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.80
  • 85.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.25e3
  • 4.25e3
  • 5.48e3
  • 7.38e3
  • 7.66e3
  • 8.05e3
85.77
  • 85.77
  • 81.65
  • 75.31
  • 74.36
  • 73.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.49e3
  • 4.49e3
84.96
  • 84.96
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.86e3
  • 4.86e3
83.73
  • 83.73
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.32e3
  • 5.32e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.77
  • 81.77
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.53e3
  • 6.53e3
78.15
  • 78.15
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.55e3
  • 6.55e3
78.09
  • 78.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.67
  • 69.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Metazoa3 genesCompare expression
Opisthokonta50 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000017105.

Cross-references

EnsemblENSDARG00000017105 (vaspb)
ZFINZDB-GENE-030131-7118 (vaspb)
EMBLBX663502, CT573179
Uniprot/SPTREMBLF1Q680, F1Q680_DANRE, F1QL90, F1QL90_DANRE, Q1LVK6, Q1LVK6_DANRE

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