D. rerio Gene: fam8a1a - ENSDARG00000017111 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017111
Namefam8a1a
Descriptionfamily with sequence similarity 8, member A1a [Source:ZFIN;Acc:ZDB-GENE-141216-66]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-136l23.1, si:dkey-241p5.3
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.44
  • 86.44
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.40e3
  • 7.40e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.42e3
  • 9.42e3
  • 1.40e4
68.47
  • 68.47
  • 52.99
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.93
  • 58.93
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
58.69
  • 58.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.76
  • 51.76
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
  • 1.85e4
48.71
  • 48.71
  • 38.17
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.60e4
  • 1.60e4
  • 1.79e4
46.32
  • 46.32
  • 40.02
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.68e4
  • 1.68e4
43.69
  • 43.69
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.10
  • 43.10
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.02
  • 43.02
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.97
  • 39.97
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.09
  • 38.09
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.88e4
  • 1.88e4
  • 1.90e4
  • 1.92e4
  • 2.04e4
  • 2.09e4
37.15
  • 37.15
  • 36.50
  • 35.80
  • 31.78
  • 29.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.38
  • 35.38
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.18
  • 34.18
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
28.85
  • 28.85
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.21
  • 25.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000017111.

Cross-references

EnsemblENSDARG00000017111 (fam8a1a)
ZFINZDB-GENE-141216-66 (fam8a1a)
Uniprot/SPTREMBLE9QC25, E9QC25_DANRE

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