D. rerio Gene: MYOF (1 to many) - ENSDARG00000017128 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017128
NameMYOF (1 to many)
Descriptionmyoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
OrganismDanio rerio (zebrafish)
Synonym(s)fer1l3, kiaa1207, myof
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.70e3
  • 1.70e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.44e3
  • 2.44e3
91.84
  • 91.84
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
  • 3.11e3
89.86
  • 89.86
  • 89.59
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
89.17
  • 89.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.53e3
  • 3.53e3
88.17
  • 88.17
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
6.15e3
  • 6.15e3
79.42
  • 79.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
75.82
  • 75.82
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.36
  • 68.36
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.06
  • 65.06
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.05
  • 63.05
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.15e4
  • 1.15e4
  • 1.21e4
  • 1.37e4
  • 1.37e4
  • 1.41e4
  • 1.53e4
  • 1.75e4
  • 1.78e4
  • 1.78e4
61.39
  • 61.39
  • 59.47
  • 54.26
  • 54.04
  • 52.94
  • 48.85
  • 41.42
  • 40.40
  • 40.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
  • 1.36e4
57.46
  • 57.46
  • 54.31
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.91
  • 56.91
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.40e4
  • 1.40e4
53.27
  • 53.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
  • 1.49e4
  • 1.66e4
50.50
  • 50.50
  • 50.11
  • 44.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
1.50e4
  • 1.50e4
  • 1.59e4
  • 1.66e4
  • 1.73e4
  • 1.74e4
  • 1.78e4
  • 1.83e4
  • 1.83e4
49.69
  • 49.69
  • 46.77
  • 44.35
  • 42.01
  • 41.75
  • 40.38
  • 38.72
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.80
  • 47.80
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.58e4
  • 1.58e4
47.22
  • 47.22
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
  • 1.98e4
47.17
  • 47.17
  • 33.54
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.08
  • 43.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSDARG00000017128.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000017128.

Cross-references

EnsemblENSDARG00000017128 (MYOF (1 to many))
HGNCHGNC:3656 (MYOF (1 to many))
EMBLCR456683
Uniprot/SPTREMBLE7EXL6, E7EXL6_DANRE

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