D. rerio Gene: sobpb - ENSDARG00000017386 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017386
Namesobpb
Descriptionsine oculis binding protein homolog (Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-041210-8]
OrganismDanio rerio (zebrafish)
Synonym(s)jxc1-b, jxc1b, q5rgy3, si:ch211-152c2.4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.63580
  • 86.63580
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.26374
  • 78.26374
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.84e3
  • 8.84e3
70.12489
  • 70.12489
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
64.85559
  • 64.85559
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.39825
  • 64.39825
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.09e4
  • 1.09e4
  • 1.11e4
  • 1.12e4
  • 1.24e4
  • 1.48e4
63.24675
  • 63.24675
  • 62.35803
  • 62.18546
  • 58.06469
  • 49.83540
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.55067
  • 55.55067
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.38e4
  • 1.38e4
  • 1.89e4
53.20501
  • 53.20501
  • 36.16313
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
52.99207
  • 52.99207
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.19921
  • 51.19921
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.73884
  • 50.73884
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.02308
  • 50.02308
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
48.88534
  • 48.88534
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
44.88365
  • 44.88365
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
39.89826
  • 39.89826
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX649468, DQ503413
EnsemblENSDARG00000017386 (sobpb)
Uniprot/SWISSPROTA7XYJ6, SOBPB_DANRE
ZFINZDB-GENE-041210-8 (sobpb)

Do not show this banner again