D. rerio Gene: slc44a5a - ENSDARG00000017398 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017398
Nameslc44a5a
Descriptionsolute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
OrganismDanio rerio (zebrafish)
Synonym(s)ctl5a, si:dkey-189n19.2, slc44a5
Orthologs(s)24 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.26e3
  • 6.26e3
79.04
  • 79.04
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.21
  • 54.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.49e4
  • 1.49e4
  • 1.81e4
50.16
  • 50.16
  • 39.56
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.32
  • 46.32
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.12
  • 43.12
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.70e4
  • 1.70e4
43.01
  • 43.01
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
  • 1.77e4
42.43
  • 42.43
  • 40.84
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.07
  • 37.07
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.92e4
  • 1.92e4
  • 2.42e4
35.72
  • 35.72
  • 19.10
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.95e4
  • 1.95e4
34.74
  • 34.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.09
  • 33.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.12
  • 29.12
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.15e4
  • 2.15e4
  • 2.49e4
28.12
  • 28.12
  • 16.78
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.49e4
  • 2.49e4
16.62
  • 16.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000017398.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression
Bilateria3 genesCompare expression
Opisthokonta5 genesCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000017398.

Cross-references

EnsemblENSDARG00000017398 (slc44a5a)
ZFINZDB-GENE-070705-333 (slc44a5a)
EMBLBX901918, CR855319
Uniprot/SPTREMBLF1R5E0, F1R5E0_DANRE

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