D. rerio Gene: ncam2 - ENSDARG00000017466 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017466
Namencam2
Descriptionneural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
OrganismDanio rerio (zebrafish)
Synonym(s)zocam
Orthologs(s)19 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
2.93e3
  • 2.93e3
  • 1.19e4
  • 1.22e4
  • 1.31e4
  • 1.37e4
  • 1.49e4
90.19
  • 90.19
  • 59.99
  • 59.08
  • 56.24
  • 54.20
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.46e3
  • 3.46e3
  • 1.26e4
88.42
  • 88.42
  • 57.80
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000036Larval:Day 4
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
3.84e3
  • 3.84e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.37e3
  • 8.79e3
  • 9.90e3
  • 1.09e4
  • 1.13e4
  • 1.31e4
  • 1.39e4
  • 1.43e4
  • 1.43e4
  • 1.46e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
  • 1.69e4
87.15
  • 87.15
  • 74.99
  • 74.99
  • 73.52
  • 71.99
  • 70.57
  • 66.84
  • 63.47
  • 62.21
  • 56.07
  • 53.62
  • 52.17
  • 52.04
  • 51.06
  • 50.25
  • 50.16
  • 49.88
  • 49.82
  • 43.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
5.86e3
  • 5.86e3
  • 1.05e4
  • 1.31e4
  • 1.83e4
  • 1.84e4
  • 1.95e4
80.37
  • 80.37
  • 64.80
  • 56.14
  • 38.63
  • 38.44
  • 34.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.58e3
  • 6.58e3
  • 7.57e3
  • 8.09e3
77.98
  • 77.98
  • 74.66
  • 72.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.64
  • 61.64
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.99
  • 60.99
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
  • 1.25e4
  • 1.26e4
  • 1.33e4
  • 1.34e4
60.50
  • 60.50
  • 58.30
  • 57.87
  • 55.53
  • 55.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
  • 1.29e4
  • 1.30e4
60.31
  • 60.31
  • 56.68
  • 56.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.24e4
  • 1.24e4
  • 1.26e4
  • 1.56e4
58.47
  • 58.47
  • 57.80
  • 47.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000030Pharyngula:Prim-15
1.30e4
  • 1.30e4
56.49
  • 56.49
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.41e4
55.31
  • 55.31
  • 52.81
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.44e4
  • 1.44e4
  • 1.59e4
51.92
  • 51.92
  • 46.92
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.49e4
  • 1.49e4
50.04
  • 50.04
AEIR
  • AEIR
UBERON:0000935anterior commissure
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003936postoptic commissure
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.53
  • 49.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.52
  • 45.52
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.64e4
  • 1.64e4
44.94
  • 44.94
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.42
  • 40.42
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.07
  • 39.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.83
  • 38.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000017466.

Cross-references

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