D. rerio Gene: reep3a - ENSDARG00000017569 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017569
Namereep3a
Descriptionreceptor accessory protein 3a [Source:ZFIN;Acc:ZDB-GENE-051127-47]
OrganismDanio rerio (zebrafish)
Synonym(s)fc41f04, reep3l, wu:fc41f04, zgc:123201

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.44e3
  • 2.44e3
91.85
  • 91.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.32
  • 91.32
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.22e3
  • 3.22e3
89.21
  • 89.21
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.37e3
  • 3.37e3
  • 1.11e4
88.71
  • 88.71
  • 62.67
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.48e3
  • 3.48e3
88.36
  • 88.36
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.07e3
  • 5.07e3
  • 1.15e4
83.04
  • 83.04
  • 61.37
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.55e3
  • 5.55e3
  • 1.13e4
81.40
  • 81.40
  • 62.18
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.28
  • 81.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.33e3
  • 7.33e3
75.46
  • 75.46
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.60e3
  • 7.60e3
74.56
  • 74.56
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.80e3
  • 7.80e3
  • 1.30e4
73.87
  • 73.87
  • 56.33
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
73.51
  • 73.51
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
8.40e3
  • 8.40e3
  • 1.15e4
  • 1.22e4
  • 1.25e4
  • 1.27e4
  • 1.28e4
  • 1.29e4
  • 1.42e4
  • 1.54e4
  • 1.81e4
71.87
  • 71.87
  • 61.43
  • 59.27
  • 58.07
  • 57.47
  • 57.23
  • 56.73
  • 52.44
  • 48.56
  • 39.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.82
  • 71.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.64e3
  • 8.64e3
71.06
  • 71.06
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.69e3
  • 8.69e3
  • 1.03e4
  • 1.05e4
70.92
  • 70.92
  • 65.63
  • 64.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.88e3
  • 9.88e3
  • 1.06e4
  • 1.06e4
  • 1.35e4
66.91
  • 66.91
  • 64.50
  • 64.39
  • 54.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
64.98
  • 64.98
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.09
  • 64.09
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.15e4
  • 1.15e4
61.61
  • 61.61
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.17e4
  • 1.17e4
60.74
  • 60.74
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.19e4
  • 1.19e4
  • 1.28e4
  • 1.50e4
60.12
  • 60.12
  • 57.03
  • 49.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.31e4
  • 1.31e4
56.19
  • 56.19
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.11
  • 56.11
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
1.33e4
  • 1.33e4
  • 1.44e4
  • 1.44e4
  • 1.46e4
  • 1.48e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
  • 1.58e4
  • 1.63e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
55.38
  • 55.38
  • 51.76
  • 51.68
  • 51.00
  • 50.44
  • 50.22
  • 49.94
  • 49.83
  • 47.20
  • 45.50
  • 40.56
  • 40.43
  • 40.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.50
  • 52.50
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.43e4
  • 1.43e4
  • 1.46e4
  • 1.52e4
  • 1.56e4
  • 1.68e4
  • 1.69e4
52.02
  • 52.02
  • 51.05
  • 49.13
  • 47.88
  • 43.69
  • 43.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX465211
EnsemblENSDARG00000017569 (reep3a)
Uniprot/SPTREMBLF1Q6Y3, F1Q6Y3_DANRE
ZFINZDB-GENE-051127-47 (reep3a)

Do not show this banner again