D. rerio Gene: nova2 - ENSDARG00000017673 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017673
Namenova2
Descriptionneuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
OrganismDanio rerio (zebrafish)
Synonym(s)id:ibd1128, nova1a, sb:cb364
Orthologs(s)5 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
271
  • 271
  • 1.13e3
  • 2.03e3
  • 1.08e4
  • 1.20e4
99.09
  • 99.09
  • 96.22
  • 93.19
  • 63.90
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
331
  • 331
  • 1.45e3
98.89
  • 98.89
  • 95.14
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
483
  • 483
  • 682
  • 811
  • 962
  • 1.00e3
  • 1.53e3
  • 1.77e3
  • 1.94e3
  • 2.77e3
  • 2.90e3
  • 4.81e3
  • 6.32e3
  • 1.25e4
98.39
  • 98.39
  • 97.72
  • 97.29
  • 96.78
  • 96.66
  • 94.87
  • 94.08
  • 93.50
  • 90.74
  • 90.30
  • 83.90
  • 78.84
  • 58.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
589
  • 589
  • 817
  • 957
  • 1.77e3
  • 1.96e3
  • 2.23e3
  • 2.97e3
  • 3.11e3
  • 3.16e3
  • 3.26e3
98.03
  • 98.03
  • 97.27
  • 96.80
  • 94.07
  • 93.45
  • 92.53
  • 90.05
  • 89.59
  • 89.41
  • 89.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
689
  • 689
  • 3.49e3
  • 1.34e4
97.70
  • 97.70
  • 88.30
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.10e3
  • 1.10e3
  • 1.63e3
  • 2.16e3
96.32
  • 96.32
  • 94.56
  • 92.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.60e3
  • 2.60e3
91.30
  • 91.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
3.46e3
  • 3.46e3
  • 3.90e3
  • 7.64e3
  • 8.58e3
  • 1.23e4
  • 1.62e4
88.42
  • 88.42
  • 86.95
  • 74.42
  • 71.27
  • 58.77
  • 45.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.85e3
  • 5.85e3
  • 7.75e3
80.41
  • 80.41
  • 74.06
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.08
  • 79.08
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.44e3
  • 6.44e3
78.43
  • 78.43
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
  • 7.11e3
77.61
  • 77.61
  • 76.19
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.07e3
  • 8.07e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.54e3
  • 8.54e3
  • 1.02e4
  • 1.03e4
  • 1.05e4
  • 1.05e4
  • 1.07e4
  • 1.17e4
  • 1.20e4
71.42
  • 71.42
  • 65.77
  • 65.37
  • 64.69
  • 64.69
  • 64.27
  • 60.70
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.73e3
  • 8.73e3
70.78
  • 70.78
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.95e3
  • 8.95e3
70.04
  • 70.04
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
9.44e3
  • 9.44e3
  • 1.26e4
  • 1.28e4
68.40
  • 68.40
  • 57.87
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.06
  • 65.06
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.89
  • 64.89
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
61.88
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.50
  • 61.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.24
  • 61.24
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.17
  • 58.17
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.75
  • 51.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.47
  • 50.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria5 species5 genesCompare expression

Orthology information comes from OMA : ENSDARG00000017673.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000017673.

Cross-references

EnsemblENSDARG00000017673 (nova2)
ZFINZDB-GENE-080211-1 (nova2)
EMBLBX088540, BX950186
Uniprot/SPTREMBLF1R4G7, F1R4G7_DANRE, X1WBB9, X1WBB9_DANRE

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