D. rerio Gene: phb2b - ENSDARG00000017728 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017728
Namephb2b
Descriptionprohibitin 2b [Source:ZFIN;Acc:ZDB-GENE-040718-430]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:86841

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.01e3
  • 1.01e3
  • 1.21e3
  • 1.27e3
  • 1.58e3
  • 1.58e3
  • 3.10e3
  • 3.94e3
  • 4.55e3
  • 5.09e3
  • 5.29e3
  • 5.54e3
  • 5.75e3
  • 5.79e3
  • 6.02e3
  • 1.07e4
  • 1.31e4
  • 1.41e4
  • 1.48e4
96.59328
  • 96.59328
  • 95.90326
  • 95.71263
  • 94.65105
  • 94.64981
  • 89.51847
  • 86.69460
  • 84.63819
  • 82.79273
  • 82.13585
  • 81.28464
  • 80.56555
  • 80.44307
  • 79.66110
  • 63.87518
  • 55.86757
  • 52.42786
  • 49.91719
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.16e3
  • 1.16e3
  • 1.14e4
96.09138
  • 96.09138
  • 61.51454
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.34e3
  • 1.34e3
  • 1.52e3
  • 1.80e3
  • 2.18e3
  • 2.65e3
  • 2.69e3
  • 2.96e3
  • 3.46e3
  • 4.14e3
  • 7.65e3
95.46131
  • 95.46131
  • 94.86252
  • 93.90378
  • 92.62872
  • 91.02973
  • 90.91616
  • 89.99030
  • 88.32238
  • 86.01832
  • 74.13452
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.41e3
  • 1.41e3
95.25344
  • 95.25344
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.62255
  • 94.62255
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.46227
  • 94.46227
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
94.09461
  • 94.09461
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
93.76067
  • 93.76067
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.90e3
  • 1.90e3
  • 1.11e4
  • 1.20e4
93.58923
  • 93.58923
  • 62.48309
  • 59.49845
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.07e3
  • 2.07e3
93.01191
  • 93.01191
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
2.32e3
  • 2.32e3
  • 2.35e3
  • 4.02e3
92.15061
  • 92.15061
  • 92.05347
  • 86.43229
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.34e3
  • 2.34e3
92.09775
  • 92.09775
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
  • 6.79e3
92.06516
  • 92.06516
  • 77.05915
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
2.42e3
  • 2.42e3
  • 3.51e3
  • 7.51e3
  • 1.16e4
91.84000
  • 91.84000
  • 88.15145
  • 74.63559
  • 60.84251
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.57e3
  • 2.57e3
  • 1.48e4
91.33023
  • 91.33023
  • 49.91550
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
2.75e3
  • 2.75e3
  • 3.38e3
  • 5.13e3
90.72536
  • 90.72536
  • 88.59115
  • 82.67091
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
89.92446
  • 89.92446
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.53e3
  • 3.53e3
88.05908
  • 88.05908
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.63e3
  • 3.63e3
87.75117
  • 87.75117
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.82e3
  • 3.82e3
  • 1.40e4
87.10774
  • 87.10774
  • 52.83639
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
3.83e3
  • 3.83e3
  • 1.28e4
87.06036
  • 87.06036
  • 56.85769
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.20e3
  • 4.20e3
85.80532
  • 85.80532
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.21e3
  • 4.21e3
  • 7.11e3
85.77610
  • 85.77610
  • 75.96503
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.45620
  • 85.45620
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.35e3
  • 4.35e3
  • 4.75e3
  • 5.27e3
  • 5.73e3
  • 8.05e3
85.31756
  • 85.31756
  • 83.95427
  • 82.18525
  • 80.63880
  • 72.79678
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.04e3
  • 5.04e3
  • 6.36e3
82.95663
  • 82.95663
  • 78.50709
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.38e3
  • 5.38e3
81.81463
  • 81.81463
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.22e3
  • 6.22e3
78.96514
  • 78.96514
AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
9.87e3
  • 9.87e3
  • 1.11e4
66.65990
  • 66.65990
  • 62.49323
AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
9.87e3
  • 9.87e3
  • 1.02e4
  • 1.06e4
  • 1.09e4
66.65314
  • 66.65314
  • 65.60979
  • 64.27218
  • 63.31813
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.08e4
  • 1.08e4
  • 1.15e4
63.62621
  • 63.62621
  • 61.10267
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.11e4
  • 1.11e4
  • 1.15e4
62.48816
  • 62.48816
  • 61.10267
AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
  • 1.16e4
  • 1.39e4
61.52495
  • 61.52495
  • 60.69907
  • 53.13116
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
60.90785
  • 60.90785
AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.25e4
  • 1.25e4
  • 1.25e4
57.87109
  • 57.87109
  • 57.87109
AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.31e4
  • 1.31e4
  • 1.33e4
  • 1.39e4
55.86038
  • 55.86038
  • 54.97294
  • 53.10304
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.48e4
55.16372
  • 55.16372
  • 49.93916
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.33e4
  • 1.33e4
  • 1.40e4
  • 1.40e4
54.97294
  • 54.97294
  • 52.75244
  • 52.75244
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
  • 1.40e4
  • 1.40e4
54.97294
  • 54.97294
  • 52.60453
  • 52.60453
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.34e4
  • 1.34e4
  • 1.40e4
  • 1.40e4
54.73317
  • 54.73317
  • 52.60453
  • 52.60453
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.39e4
  • 1.39e4
  • 1.39e4
  • 1.39e4
52.91751
  • 52.91751
  • 52.91751
  • 52.91751
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000017728 (phb2b)
Uniprot/SPTREMBLF1R9C6, F1R9C6_DANRE
ZFINZDB-GENE-040718-430 (phb2b)

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