D. rerio Gene: sec63 - ENSDARG00000017740 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017740
Namesec63
DescriptionSEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
OrganismDanio rerio (zebrafish)
Synonym(s)sec63-like, zgc:92718

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.48e3
  • 1.48e3
94.99434
  • 94.99434
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
2.08e3
  • 2.08e3
  • 3.17e3
  • 3.52e3
  • 4.79e3
  • 5.18e3
  • 5.25e3
  • 5.44e3
  • 5.50e3
  • 6.43e3
  • 7.87e3
92.96639
  • 92.96639
  • 89.28192
  • 88.11282
  • 83.80086
  • 82.48593
  • 82.26367
  • 81.62554
  • 81.39908
  • 78.25782
  • 73.40202
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.50e3
  • 2.50e3
91.55983
  • 91.55983
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.85133
  • 90.85133
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.89e3
  • 2.89e3
  • 4.47e3
90.25231
  • 90.25231
  • 84.90594
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
3.00e3
  • 3.00e3
  • 3.35e3
  • 3.62e3
  • 3.71e3
  • 4.35e3
  • 4.46e3
  • 4.63e3
  • 4.85e3
  • 5.08e3
  • 5.14e3
  • 5.14e3
  • 5.18e3
  • 5.76e3
  • 6.91e3
89.85035
  • 89.85035
  • 88.69197
  • 87.76579
  • 87.44975
  • 85.30554
  • 84.93529
  • 84.35021
  • 83.59775
  • 82.83304
  • 82.63924
  • 82.62765
  • 82.50234
  • 80.54064
  • 76.65426
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
3.08e3
  • 3.08e3
  • 3.56e3
  • 3.65e3
  • 4.08e3
  • 6.67e3
89.60769
  • 89.60769
  • 87.96806
  • 87.67904
  • 86.21604
  • 77.45695
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.62e3
  • 3.62e3
87.77868
  • 87.77868
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.75e3
  • 3.75e3
  • 4.86e3
  • 4.86e3
87.33778
  • 87.33778
  • 83.58222
  • 83.58065
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.79e3
  • 3.79e3
87.18292
  • 87.18292
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.82e3
  • 3.82e3
87.08533
  • 87.08533
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.82e3
  • 3.82e3
87.07750
  • 87.07750
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.86506
  • 86.86506
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.28429
  • 86.28429
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.05445
  • 86.05445
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.21e3
  • 4.21e3
85.76424
  • 85.76424
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
85.10131
  • 85.10131
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
84.64641
  • 84.64641
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.62005
  • 84.62005
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
83.85750
  • 83.85750
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.82e3
  • 4.82e3
  • 5.82e3
83.71809
  • 83.71809
  • 80.31695
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.90e3
  • 4.90e3
  • 6.65e3
83.44546
  • 83.44546
  • 77.52577
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.96e3
  • 4.96e3
83.22856
  • 83.22856
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.10716
  • 83.10716
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.38678
  • 81.38678
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.62e3
  • 5.62e3
81.00526
  • 81.00526
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.34e3
  • 6.34e3
  • 6.34e3
  • 6.34e3
  • 6.58e3
  • 6.83e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.89e3
  • 8.46e3
  • 8.46e3
  • 8.63e3
  • 8.71e3
  • 8.71e3
  • 8.88e3
  • 8.88e3
  • 9.05e3
  • 9.05e3
  • 9.05e3
  • 9.62e3
  • 9.87e3
  • 9.87e3
78.56975
  • 78.56975
  • 78.56975
  • 78.56975
  • 77.77439
  • 76.91633
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 74.99829
  • 73.32320
  • 71.42518
  • 71.41166
  • 70.82487
  • 70.57472
  • 70.57472
  • 69.98817
  • 69.98310
  • 69.42923
  • 69.42923
  • 69.42923
  • 67.48142
  • 66.65990
  • 66.65314
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.07e3
  • 8.07e3
  • 8.83e3
  • 1.04e4
72.73523
  • 72.73523
  • 70.14720
  • 64.74629
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.52e3
  • 8.52e3
71.22130
  • 71.22130
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
8.70e3
  • 8.70e3
  • 1.07e4
  • 1.09e4
70.59382
  • 70.59382
  • 63.79325
  • 63.32334
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.00613
  • 69.00613
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU207298, CU861662, CU861884
EnsemblENSDARG00000017740 (sec63)
Uniprot/SPTREMBLF1QGI2, F1QGI2_DANRE
ZFINZDB-GENE-040718-328 (sec63)

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