D. rerio Gene: atp5g3a - ENSDARG00000017775 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017775
Nameatp5g3a
DescriptionATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-040426-857]
OrganismDanio rerio (zebrafish)
Synonym(s)atp5g3, zgc:55970, zgc:86872
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
296
  • 296
  • 1.43e3
99.01
  • 99.01
  • 95.21
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
336
  • 336
98.88
  • 98.88
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
358
  • 358
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
360
  • 360
98.80
  • 98.80
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
421
  • 421
  • 442
  • 470
  • 472
  • 473
  • 512
  • 576
  • 613
  • 660
  • 706
  • 724
  • 812
  • 840
  • 2.39e3
98.60
  • 98.60
  • 98.52
  • 98.43
  • 98.42
  • 98.42
  • 98.29
  • 98.07
  • 97.95
  • 97.79
  • 97.64
  • 97.58
  • 97.29
  • 97.19
  • 92.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
440
  • 440
  • 497
  • 532
  • 550
  • 551
  • 600
  • 603
  • 701
  • 865
  • 1.09e3
98.53
  • 98.53
  • 98.34
  • 98.22
  • 98.16
  • 98.16
  • 97.99
  • 97.99
  • 97.66
  • 97.11
  • 96.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
455
  • 455
  • 533
  • 551
98.48
  • 98.48
  • 98.22
  • 98.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
513
  • 513
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
525
  • 525
  • 764
  • 783
  • 1.45e3
98.24
  • 98.24
  • 97.44
  • 97.38
  • 95.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
546
  • 546
  • 1.31e3
98.17
  • 98.17
  • 95.63
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
556
  • 556
  • 698
98.14
  • 98.14
  • 97.67
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
564
  • 564
98.11
  • 98.11
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
590
  • 590
98.03
  • 98.03
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
601
  • 601
  • 1.25e3
97.99
  • 97.99
  • 95.82
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
715
  • 715
97.61
  • 97.61
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
736
  • 736
  • 768
  • 896
  • 998
  • 1.02e3
  • 1.04e3
97.54
  • 97.54
  • 97.43
  • 97.00
  • 96.66
  • 96.57
  • 96.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
739
  • 739
97.53
  • 97.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
749
  • 749
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
755
  • 755
97.48
  • 97.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
843
  • 843
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
974
  • 974
96.74
  • 96.74
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.50
  • 96.50
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.14e3
  • 1.14e3
  • 1.32e3
  • 1.54e3
  • 8.18e3
  • 8.33e3
96.19
  • 96.19
  • 95.58
  • 94.86
  • 72.63
  • 72.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.50e3
  • 1.50e3
94.98
  • 94.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.99e3
  • 1.99e3
93.34
  • 93.34
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
92.73
  • 92.73
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.02
  • 90.02
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.03e3
  • 5.03e3
83.15
  • 83.15
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.42e3
  • 6.42e3
78.49
  • 78.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000017775.

Cross-references

EnsemblENSDARG00000017775 (atp5g3a)
ZFINZDB-GENE-040426-857 (atp5g3a)
EMBLBC047199, BC078654, CU639436
Uniprot/SPTREMBLQ7ZYW7, Q7ZYW7_DANRE

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