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D. rerio Gene: chrnb2b - ENSDARG00000017790 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017790
Namechrnb2b
Descriptioncholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
OrganismDanio rerio (zebrafish)
Synonym(s)chrnb2
Orthologs(s)16 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.12e3
  • 6.12e3
79.52
  • 79.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.63
  • 76.63
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.14e4
  • 1.14e4
  • 1.38e4
  • 1.57e4
  • 1.60e4
  • 1.75e4
61.77
  • 61.77
  • 53.75
  • 47.51
  • 46.52
  • 41.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.29e4
57.12
  • 57.12
  • 56.69
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.63e4
55.83
  • 55.83
  • 45.53
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.50e4
  • 1.50e4
  • 1.71e4
49.73
  • 49.73
  • 42.90
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.43
  • 45.43
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.77e4
  • 1.77e4
40.65
  • 40.65
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.93
  • 34.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.08
  • 27.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000017790.

Cross-references

EnsemblENSDARG00000017790 (chrnb2b)
ZFINZDB-GENE-070821-3 (chrnb2b)
EMBLBX950871
Uniprot/SPTREMBLE7F4S7, E7F4S7_DANRE, E9QCW8, E9QCW8_DANRE

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