D. rerio Gene: gsk3b - ENSDARG00000017803 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017803
Namegsk3b
Descriptionglycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
OrganismDanio rerio (zebrafish)
Synonym(s)fb68h05, fk80d11, gsk-3[b], gsk3, wu:fb68h05, wu:fk80d11
Orthologs(s)19 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
659
  • 659
  • 1.84e3
97.80
  • 97.80
  • 93.84
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
704
  • 704
97.65
  • 97.65
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
826
  • 826
97.24
  • 97.24
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
834
  • 834
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
878
  • 878
  • 1.23e3
  • 1.26e3
  • 1.29e3
  • 1.42e3
  • 1.60e3
  • 1.62e3
  • 1.74e3
  • 1.83e3
  • 2.40e3
  • 3.17e3
  • 3.42e3
  • 5.96e3
  • 1.27e4
97.06
  • 97.06
  • 95.88
  • 95.79
  • 95.69
  • 95.26
  • 94.63
  • 94.59
  • 94.17
  • 93.86
  • 91.96
  • 89.39
  • 88.55
  • 80.05
  • 57.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
898
  • 898
  • 1.04e3
  • 1.31e3
  • 1.81e3
97.00
  • 97.00
  • 96.53
  • 95.62
  • 93.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.06e3
  • 1.06e3
  • 1.79e3
  • 1.83e3
  • 1.86e3
  • 1.87e3
  • 3.03e3
  • 3.15e3
  • 3.39e3
  • 3.73e3
  • 4.15e3
96.44
  • 96.44
  • 94.01
  • 93.88
  • 93.77
  • 93.75
  • 89.87
  • 89.44
  • 88.65
  • 87.52
  • 86.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.26e3
  • 1.26e3
  • 2.29e3
  • 4.18e3
95.80
  • 95.80
  • 92.34
  • 86.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.27e3
  • 2.27e3
  • 3.06e3
92.41
  • 92.41
  • 89.76
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.48e3
  • 2.48e3
91.71
  • 91.71
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
2.87e3
  • 2.87e3
  • 2.94e3
  • 3.82e3
  • 3.84e3
  • 4.39e3
  • 8.52e3
90.38
  • 90.38
  • 90.17
  • 87.21
  • 87.13
  • 85.30
  • 71.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
  • 5.16e3
89.52
  • 89.52
  • 82.74
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
86.04
  • 86.04
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.08e3
  • 5.08e3
82.98
  • 82.98
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
81.94
  • 81.94
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.40
  • 81.40
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.39
  • 80.39
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.12
  • 79.12
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.87
  • 76.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
75.14
  • 75.14
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.48
  • 73.48
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.38e3
  • 8.38e3
71.96
  • 71.96
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.60
  • 70.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.91
  • 65.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.80
  • 64.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.11e4
  • 1.11e4
  • 1.50e4
  • 1.66e4
62.75
  • 62.75
  • 49.64
  • 44.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.63e4
  • 1.63e4
45.27
  • 45.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSDARG00000017803.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Bilateria3 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000017803.

Cross-references

EnsemblENSDARG00000017803 (gsk3b)
ZFINZDB-GENE-990714-4 (gsk3b)
EMBLAJ223502, BC162371, CR759880
Uniprot/SPTREMBLQ9YH60, Q9YH60_DANRE

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