D. rerio Gene: si:ch211-210c8.6 - ENSDARG00000017811 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017811
Namesi:ch211-210c8.6
Descriptionsi:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
OrganismDanio rerio (zebrafish)
Synonym(s)fc47e12, wu:fc47e12
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.50
  • 93.50
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.92
  • 91.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.50e3
  • 2.50e3
91.62
  • 91.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.95
  • 90.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.84
  • 89.84
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.53e3
  • 3.53e3
88.17
  • 88.17
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
3.63e3
  • 3.63e3
  • 4.91e3
  • 7.64e3
  • 8.09e3
  • 8.12e3
87.85
  • 87.85
  • 83.55
  • 74.43
  • 72.90
  • 72.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.70e3
  • 3.70e3
87.62
  • 87.62
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.78
  • 85.78
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.28e3
  • 4.28e3
  • 5.18e3
85.68
  • 85.68
  • 82.67
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.14
  • 85.14
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
4.56e3
  • 4.56e3
  • 7.64e3
  • 8.56e3
  • 9.11e3
  • 9.80e3
  • 1.05e4
84.72
  • 84.72
  • 74.41
  • 71.36
  • 69.49
  • 67.20
  • 64.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
4.65e3
  • 4.65e3
  • 4.76e3
  • 5.82e3
  • 6.72e3
  • 7.23e3
  • 7.43e3
  • 7.64e3
  • 7.69e3
  • 8.84e3
  • 9.32e3
84.42
  • 84.42
  • 84.07
  • 80.50
  • 77.51
  • 75.78
  • 75.14
  • 74.43
  • 74.24
  • 70.40
  • 68.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.92
  • 82.92
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.66e3
  • 5.66e3
81.04
  • 81.04
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.67e3
  • 5.67e3
81.01
  • 81.01
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.86e3
  • 5.86e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
80.28
  • 80.28
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.00e3
  • 6.00e3
  • 8.15e3
79.93
  • 79.93
  • 72.72
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
79.65
  • 79.65
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.41e3
  • 6.41e3
78.55
  • 78.55
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.15e3
  • 7.15e3
  • 9.12e3
  • 1.03e4
  • 1.31e4
76.06
  • 76.06
  • 69.45
  • 65.56
  • 56.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.26e3
  • 7.26e3
  • 8.61e3
  • 9.24e3
75.69
  • 75.69
  • 71.18
  • 69.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
  • 8.55e3
75.55
  • 75.55
  • 71.38
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.11e3
  • 8.11e3
  • 8.17e3
  • 8.28e3
  • 8.70e3
  • 9.14e3
  • 9.19e3
  • 9.33e3
  • 9.48e3
  • 9.69e3
  • 9.91e3
  • 1.02e4
  • 1.05e4
  • 1.05e4
  • 1.06e4
72.84
  • 72.84
  • 72.63
  • 72.27
  • 70.86
  • 69.41
  • 69.22
  • 68.77
  • 68.27
  • 67.56
  • 66.82
  • 65.78
  • 64.98
  • 64.72
  • 64.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.64e3
  • 8.64e3
71.08
  • 71.08
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.99e3
  • 8.99e3
69.92
  • 69.92
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.18e3
  • 9.18e3
69.28
  • 69.28
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.74e3
  • 9.74e3
67.37
  • 67.37
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.77e3
  • 9.77e3
  • 1.07e4
67.28
  • 67.28
  • 64.08
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000017811.

Cross-references

EnsemblENSDARG00000017811 (si:ch211-210c8.6)
ZFINZDB-GENE-030131-3630 (si:ch211-210c8.6)
EMBLCR354542
Uniprot/SPTREMBLF1QW92, F1QW92_DANRE

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