D. rerio Gene: pigs - ENSDARG00000017813 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017813
Namepigs
Descriptionphosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:152927
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.40e3
  • 4.40e3
  • 4.94e3
  • 7.97e3
  • 8.39e3
  • 8.43e3
85.28
  • 85.28
  • 83.45
  • 73.30
  • 71.91
  • 71.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.11e3
  • 5.11e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.36e3
  • 5.36e3
  • 1.50e4
82.07
  • 82.07
  • 49.89
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
5.79e3
  • 5.79e3
  • 7.38e3
  • 8.73e3
  • 9.06e3
  • 9.35e3
  • 1.07e4
  • 1.08e4
  • 1.09e4
  • 1.12e4
  • 1.13e4
80.61
  • 80.61
  • 75.29
  • 70.77
  • 69.68
  • 68.68
  • 64.24
  • 63.83
  • 63.58
  • 62.59
  • 62.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
  • 9.99e3
78.58
  • 78.58
  • 66.57
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.45e3
  • 6.45e3
  • 9.09e3
78.40
  • 78.40
  • 69.55
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.48
  • 76.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
7.14e3
  • 7.14e3
  • 7.37e3
  • 8.34e3
  • 1.11e4
  • 1.25e4
  • 1.27e4
76.08
  • 76.08
  • 75.34
  • 72.08
  • 62.81
  • 58.28
  • 57.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
7.45e3
  • 7.45e3
  • 9.03e3
  • 9.15e3
  • 9.16e3
  • 9.21e3
  • 9.33e3
  • 9.35e3
  • 9.43e3
  • 9.49e3
  • 9.53e3
  • 9.57e3
  • 9.67e3
  • 9.68e3
  • 9.72e3
  • 1.46e4
  • 1.47e4
  • 1.49e4
75.06
  • 75.06
  • 69.76
  • 69.38
  • 69.32
  • 69.16
  • 68.75
  • 68.68
  • 68.41
  • 68.21
  • 68.10
  • 67.94
  • 67.61
  • 67.60
  • 67.45
  • 51.12
  • 50.90
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.49e3
  • 7.49e3
  • 9.14e3
  • 9.84e3
  • 1.01e4
74.92
  • 74.92
  • 69.39
  • 67.06
  • 66.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.53e3
  • 7.53e3
74.80
  • 74.80
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.64e3
  • 7.64e3
74.43
  • 74.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.70e3
  • 7.70e3
74.21
  • 74.21
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.06e3
  • 8.06e3
73.01
  • 73.01
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
8.85e3
  • 8.85e3
  • 9.32e3
  • 1.23e4
70.35
  • 70.35
  • 68.78
  • 58.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.89e3
  • 8.89e3
70.22
  • 70.22
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.64
  • 69.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.17
  • 69.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.30e3
  • 9.30e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.01e4
  • 1.01e4
66.18
  • 66.18
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.02e4
  • 1.02e4
65.71
  • 65.71
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.50e4
64.41
  • 64.41
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.11e4
64.12
  • 64.12
  • 62.84
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.05
  • 62.05
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.15e4
  • 1.15e4
61.64
  • 61.64
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.92
  • 58.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000017813.

Cross-references

EnsemblENSDARG00000017813 (pigs)
ZFINZDB-GENE-060929-436 (pigs)
EMBLCU928208
Uniprot/SPTREMBLF1QND8, F1QND8_DANRE, I3ISB5, I3ISB5_DANRE

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