D. rerio Gene: casp3a - ENSDARG00000017905 - Danio rerio (zebrafish)

Gene Information

Ensembl IDENSDARG00000017905
Namecasp3a
Descriptioncaspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
639
  • 639
  • 812
  • 3.83e3
  • 1.33e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.04e3
  • 1.04e3
  • 1.31e3
  • 1.48e3
  • 2.08e3
  • 2.24e3
  • 2.56e3
  • 3.03e3
  • 4.71e3
  • 5.57e3
  • 5.63e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.22e3
  • 1.22e3
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
  • 3.82e3
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.12e3
  • 2.12e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
  • 2.37e3
  • 2.95e3
  • 3.02e3
  • 3.18e3
  • 3.25e3
  • 3.53e3
  • 3.84e3
  • 4.57e3
  • 4.91e3
  • 4.98e3
  • 5.18e3
  • 5.59e3
  • 6.03e3
  • 1.40e4
  • 1.43e4
  • 1.45e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.24e3
  • 2.24e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
2.34e3
  • 2.34e3
  • 8.49e3
  • 8.50e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
  • 7.13e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.66e3
  • 2.66e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.06e3
  • 3.06e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
3.06e3
  • 3.06e3
  • 3.51e3
  • 4.25e3
  • 5.04e3
  • 5.12e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.12e3
  • 3.12e3
  • 3.56e3
  • 5.42e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.43e3
  • 3.43e3
  • 3.90e3
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.43e3
  • 4.43e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.02e3
  • 6.02e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.54e3
  • 6.54e3
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.60e3
  • 7.60e3
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.35e3
  • 9.35e3
  • 9.58e3
  • 9.58e3
  • 1.25e4
  • 1.27e4
  • 1.37e4
  • 1.38e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000032Pharyngula:High-pec
1.09e4
  • 1.09e4
  • 1.27e4
  • 1.36e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000033Hatching:Long-pec
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.31e4
  • 1.31e4
  • 1.31e4
  • 1.39e4
  • 1.39e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000092axis (Danio)
  • ZFS:0000020Gastrula:75%-epiboly
1.32e4
  • 1.32e4
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000035Larval:Protruding-mouth
1.36e4
  • 1.36e4
AEIR
  • AEIR
UBERON:2000298vent
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0002541germ ring
  • ZFS:0000020Gastrula:75%-epiboly
1.48e4
  • 1.48e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data: