D. rerio Gene: sfxn2 - ENSDARG00000017960 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000017960
Namesfxn2
Descriptionsideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fa03a09, zgc:55508, zgc:77081

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.42e3
  • 1.42e3
  • 1.67e3
  • 2.34e3
  • 2.36e3
  • 2.87e3
  • 3.09e3
  • 3.69e3
  • 4.04e3
  • 5.12e3
  • 5.13e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.48e3
  • 2.48e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
2.83e3
  • 2.83e3
  • 2.99e3
  • 4.72e3
  • 5.16e3
  • 5.47e3
  • 5.89e3
  • 5.99e3
  • 6.03e3
  • 6.09e3
  • 6.20e3
  • 6.30e3
  • 6.46e3
  • 6.48e3
  • 6.58e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.91e3
  • 6.97e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 8.38e3
  • 8.46e3
  • 8.88e3
  • 8.88e3
  • 9.24e3
  • 1.42e4
  • 1.45e4
  • 1.45e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
  • 7.46e3
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
5.28e3
  • 5.28e3
  • 6.71e3
  • 6.81e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
5.36e3
  • 5.36e3
  • 5.36e3
  • 5.54e3
  • 5.99e3
  • 6.67e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.37e3
  • 5.37e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
5.62e3
  • 5.62e3
  • 5.85e3
  • 6.29e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.65e3
  • 5.65e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.75e3
  • 5.75e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.88e3
  • 5.88e3
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.94e3
  • 5.94e3
  • 1.40e4
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.06e3
  • 6.06e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.10e3
  • 6.10e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.72e3
  • 6.72e3
  • 9.57e3
  • 9.86e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.62e3
  • 7.62e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.63e3
  • 8.63e3
  • 1.04e4
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.91e3
  • 8.91e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
9.91e3
  • 9.91e3
  • 1.20e4
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC066638, BC153405, BX279525
EnsemblENSDARG00000017960 (sfxn2)
Uniprot/SPTREMBLF1R4J2, F1R4J2_DANRE, Q4V945, Q4V945_DANRE, Q6NYD2, Q6NYD2_DANRE
ZFINZDB-GENE-040426-2831 (sfxn2)

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