D. rerio Gene: pak4 - ENSDARG00000018110 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018110
Namepak4
Descriptionp21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
OrganismDanio rerio (zebrafish)
Synonym(s)im:5916170, wu:fd12b01, zgc:92014
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
662
  • 662
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.18e3
  • 1.18e3
  • 1.24e3
  • 1.25e3
  • 2.56e3
  • 2.58e3
96.06
  • 96.06
  • 95.84
  • 95.83
  • 91.44
  • 91.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:00072368 cell stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.88e3
  • 1.88e3
  • 1.99e3
  • 3.16e3
  • 3.39e3
  • 3.93e3
  • 4.35e3
  • 4.39e3
  • 4.40e3
  • 5.40e3
  • 5.96e3
  • 6.23e3
  • 6.36e3
  • 6.54e3
  • 6.79e3
  • 6.89e3
  • 6.97e3
  • 7.08e3
  • 8.96e3
  • 1.37e4
  • 1.44e4
  • 1.49e4
93.71
  • 93.71
  • 93.35
  • 89.41
  • 88.64
  • 86.85
  • 85.44
  • 85.30
  • 85.26
  • 81.91
  • 80.03
  • 79.13
  • 78.71
  • 78.12
  • 77.27
  • 76.94
  • 76.66
  • 76.30
  • 69.99
  • 54.18
  • 51.88
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.40e3
  • 2.40e3
  • 2.96e3
  • 3.60e3
  • 9.47e3
91.97
  • 91.97
  • 90.08
  • 87.94
  • 68.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.88e3
  • 2.88e3
90.36
  • 90.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
3.20e3
  • 3.20e3
  • 3.50e3
  • 3.63e3
  • 4.00e3
  • 4.59e3
  • 5.08e3
89.30
  • 89.30
  • 88.27
  • 87.86
  • 86.60
  • 84.63
  • 83.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.47e3
  • 3.47e3
88.37
  • 88.37
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.61e3
  • 3.61e3
87.91
  • 87.91
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
3.96e3
  • 3.96e3
  • 5.14e3
  • 5.29e3
  • 5.84e3
  • 6.04e3
  • 6.88e3
  • 7.02e3
  • 7.24e3
  • 8.14e3
  • 1.07e4
86.75
  • 86.75
  • 82.78
  • 82.29
  • 80.44
  • 79.76
  • 76.96
  • 76.49
  • 75.77
  • 72.76
  • 64.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.77
  • 85.77
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.31e3
  • 4.31e3
85.58
  • 85.58
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.47
  • 85.47
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.24
  • 84.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.73e3
  • 4.73e3
84.17
  • 84.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.98e3
  • 4.98e3
  • 5.92e3
83.34
  • 83.34
  • 80.19
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
83.04
  • 83.04
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.68
  • 80.68
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
  • 6.37e3
80.50
  • 80.50
  • 78.69
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
  • 1.20e4
80.01
  • 80.01
  • 59.74
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.73
  • 78.73
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.55e3
  • 6.55e3
78.08
  • 78.08
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.64
  • 77.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
77.04
  • 77.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.81
  • 75.81
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
7.35e3
  • 7.35e3
  • 8.45e3
  • 8.65e3
75.41
  • 75.41
  • 71.72
  • 71.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
72.30
  • 72.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.28e3
  • 8.28e3
72.29
  • 72.29
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.18
  • 72.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.35e3
  • 8.35e3
72.04
  • 72.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
67.49
  • 67.49
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:0007812post-anal tail
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.64
  • 59.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000018110 (pak4)
ZFINZDB-GENE-040704-69 (pak4)
EMBLCU856359
Uniprot/SPTREMBLF1QZR2, F1QZR2_DANRE

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