D. rerio Gene: acvrl1 - ENSDARG00000018179 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018179
Nameacvrl1
Descriptionactivin A receptor type II-like 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
OrganismDanio rerio (zebrafish)
Synonym(s)alk1, hm:zehn1109, vbg, vgb, violet beauregarde, zehn1109

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
425
  • 425
98.58
  • 98.58
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.92
  • 95.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.10e3
  • 3.10e3
  • 1.32e4
89.62
  • 89.62
  • 55.90
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
87.45
  • 87.45
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
86.91
  • 86.91
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.27e3
  • 4.27e3
85.72
  • 85.72
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.46e3
  • 4.46e3
  • 7.84e3
85.08
  • 85.08
  • 73.74
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
4.87e3
  • 4.87e3
  • 5.32e3
  • 1.15e4
83.69
  • 83.69
  • 82.20
  • 61.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.90e3
  • 4.90e3
83.60
  • 83.60
AEIR
  • AEIR
UBERON:0001532internal carotid artery
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
4.98e3
  • 4.98e3
  • 1.49e4
  • 1.49e4
83.34
  • 83.34
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003118pharyngeal arch artery 1
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
4.98e3
  • 4.98e3
  • 1.49e4
  • 1.49e4
83.34
  • 83.34
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001054lateral dorsal aorta
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
4.98e3
  • 4.98e3
  • 1.49e4
  • 1.49e4
83.34
  • 83.34
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
81.46
  • 81.46
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.93e3
  • 5.93e3
  • 1.43e4
80.16
  • 80.16
  • 52.17
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
77.89
  • 77.89
AEIR
  • AEIR
UBERON:0002065posterior cardinal vein
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2001051caudal division of the internal carotid artery
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2005000basal communicating artery
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.76e3
  • 9.76e3
  • 1.24e4
  • 1.24e4
67.32
  • 67.32
  • 58.60
  • 58.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
9.88e3
  • 9.88e3
  • 1.06e4
  • 1.15e4
  • 1.16e4
  • 1.20e4
  • 1.20e4
  • 1.32e4
  • 1.33e4
  • 1.46e4
  • 1.49e4
66.92
  • 66.92
  • 64.57
  • 61.38
  • 61.28
  • 59.84
  • 59.66
  • 55.67
  • 55.33
  • 51.00
  • 50.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
  • 1.22e4
  • 1.25e4
  • 1.36e4
  • 1.43e4
  • 1.43e4
  • 1.45e4
  • 1.46e4
  • 1.48e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.57e4
65.61
  • 65.61
  • 59.08
  • 58.02
  • 54.39
  • 52.24
  • 52.12
  • 51.51
  • 51.19
  • 50.28
  • 50.25
  • 50.00
  • 49.99
  • 49.99
  • 47.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.03e4
  • 1.03e4
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.17e4
  • 1.17e4
  • 1.72e4
  • 1.75e4
60.84
  • 60.84
  • 42.33
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.76
  • 60.76
AEIR
  • AEIR
UBERON:0005805dorsal aorta
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.88
  • 52.88
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.57
  • 52.57
AEIR
  • AEIR
UBERON:2001059cranial division of the internal carotid artery
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005032optic vein
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005044optic artery
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.95
  • 41.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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