D. rerio Gene: mthfd1a - ENSDARG00000018266 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018266
Namemthfd1a
Descriptionmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-1h6.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
AEIR
  • AEIR
UBERON:0003080anterior neural tube
  • ZFS:0000029Pharyngula:Prim-5
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.33e4
  • 1.59e4
  • 1.91e4
  • 1.93e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX255917
EnsemblENSDARG00000018266 (mthfd1a)
Uniprot/SPTREMBLQ5RIH2, Q5RIH2_DANRE
ZFINZDB-GENE-041001-127 (mthfd1a)

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