D. rerio Gene: si:ch73-186j5.2 - ENSDARG00000018301 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018301
Namesi:ch73-186j5.2
Descriptionsi:ch73-186j5.2 [Source:ZFIN;Acc:ZDB-GENE-070705-214]
OrganismDanio rerio (zebrafish)
Orthologs(s)7 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.64e4
  • 1.64e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.13
  • 43.13
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.67
  • 40.67
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.21
  • 34.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.26
  • 27.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.27
  • 24.27
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.29e4
  • 2.29e4
  • 2.38e4
  • 2.72e4
23.21
  • 23.21
  • 20.47
  • 8.89
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Eumetazoa7 genesCompare expression
Opisthokonta9 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000018301.

Cross-references

EnsemblENSDARG00000018301 (si:ch73-186j5.2)
ZFINZDB-GENE-070705-214 (si:ch73-186j5.2)
EMBLCT573204
Uniprot/SPTREMBLA5WW48, A5WW48_DANRE

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