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D. rerio Gene: ftr06 - ENSDARG00000018506 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018506
Nameftr06
DescriptionfinTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-235o23.7
Orthologs(s)86 orthologs
Paralog(s)55 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.07
  • 63.07
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.06
  • 51.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.32
  • 49.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.05
  • 47.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.60e4
  • 1.60e4
  • 1.66e4
46.38
  • 46.38
  • 44.52
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.76
  • 44.76
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.15
  • 44.15
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.85
  • 43.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.93
  • 42.93
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.99e4
  • 1.99e4
  • 2.08e4
  • 2.21e4
33.46
  • 33.46
  • 30.30
  • 25.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
2.02e4
  • 2.02e4
32.45
  • 32.45
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.53
  • 27.53
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
25.92
  • 25.92
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.00
  • 25.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.16
  • 23.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species86 genesCompare expression

Orthology information comes from OMA : ENSDARG00000018506.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi32 genesCompare expression
Clupeocephala52 genesCompare expression
Euteleostomi55 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000018506.

Cross-references

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