D. rerio Gene: tnfrsf1a - ENSDARG00000018569 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018569
Nametnfrsf1a
Descriptiontumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
OrganismDanio rerio (zebrafish)
Synonym(s)tnf receptor 1 (tr1), tnfr1, wu:fj65b10, zgc:85914

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
1.64e3
  • 1.64e3
  • 4.93e3
  • 4.93e3
  • 6.48e3
  • 6.58e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.91e3
  • 6.97e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 8.88e3
  • 1.45e4
  • 1.45e4
  • 1.53e4
  • 1.57e4
  • 1.59e4
  • 1.60e4
  • 1.60e4
  • 1.61e4
  • 1.61e4
  • 1.62e4
  • 1.63e4
  • 1.64e4
  • 1.68e4
  • 1.68e4
  • 1.71e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.14e3
  • 2.14e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.16e3
  • 2.16e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.04e3
  • 3.04e3
  • 1.18e4
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.67e3
  • 3.67e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000034Hatching:Pec-fin
4.90e3
  • 4.90e3
  • 9.86e3
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000034Hatching:Pec-fin
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • ZFS:0000033Hatching:Long-pec
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
8.88e3
  • 8.88e3
  • 9.50e3
  • 1.11e4
  • 1.11e4
  • 1.22e4
  • 1.40e4
  • 1.40e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
9.05e3
  • 9.05e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.80e3
  • 9.80e3
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
9.86e3
  • 9.86e3
  • 1.23e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000034Hatching:Pec-fin
9.86e3
  • 9.86e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
  • 1.34e4
  • 1.43e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
  • 1.33e4
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000033Hatching:Long-pec
1.32e4
  • 1.32e4
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.38e4
  • 1.49e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000033Hatching:Long-pec
1.40e4
  • 1.40e4
AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR533575
EnsemblENSDARG00000018569 (tnfrsf1a)
Uniprot/SPTREMBLF1QQS0, F1QQS0_DANRE
ZFINZDB-GENE-040426-2252 (tnfrsf1a)

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