D. rerio Gene: parp16 - ENSDARG00000018593 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018593
Nameparp16
Descriptionpoly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77744
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000151pectoral fin
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
2.49e3
  • 2.49e3
  • 6.97e3
  • 7.47e3
91.67
  • 91.67
  • 76.66
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.30
  • 88.30
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
3.74e3
  • 3.74e3
  • 5.14e3
  • 1.21e4
87.47
  • 87.47
  • 82.80
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.37
  • 87.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
3.89e3
  • 3.89e3
  • 5.60e3
  • 7.47e3
  • 9.25e3
86.98
  • 86.98
  • 81.24
  • 74.99
  • 69.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.90e3
  • 3.90e3
86.96
  • 86.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
84.19
  • 84.19
AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.98e3
  • 4.98e3
  • 4.98e3
83.33
  • 83.33
  • 83.33
AEIR
  • AEIR
  • AEIR
UBERON:0001637artery
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.98e3
  • 4.98e3
  • 4.98e3
  • 5.75e3
  • 1.09e4
  • 1.09e4
83.33
  • 83.33
  • 83.33
  • 80.76
  • 63.63
  • 63.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.99e3
  • 4.99e3
83.30
  • 83.30
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.82
  • 82.82
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.58e3
  • 5.58e3
  • 7.47e3
81.33
  • 81.33
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0001638vein
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.75e3
  • 5.75e3
  • 5.75e3
  • 6.97e3
  • 1.03e4
  • 1.03e4
80.76
  • 80.76
  • 80.76
  • 76.66
  • 65.61
  • 65.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.75e3
  • 5.75e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.73
  • 80.73
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.78e3
  • 5.78e3
80.66
  • 80.66
AEIR
  • AEIR
UBERON:2000040median fin fold
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.97e3
  • 5.97e3
  • 8.30e3
  • 9.33e3
  • 1.16e4
  • 1.16e4
80.00
  • 80.00
  • 72.22
  • 68.74
  • 61.10
  • 61.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.08e3
  • 6.08e3
  • 6.27e3
  • 6.51e3
  • 7.55e3
  • 7.83e3
  • 8.40e3
  • 8.50e3
  • 9.14e3
  • 9.20e3
  • 1.13e4
79.66
  • 79.66
  • 78.99
  • 78.20
  • 74.71
  • 73.80
  • 71.88
  • 71.55
  • 69.39
  • 69.19
  • 62.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
79.51
  • 79.51
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
6.58e3
  • 6.58e3
  • 9.50e3
  • 1.03e4
  • 1.04e4
77.98
  • 77.98
  • 68.19
  • 65.66
  • 65.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.30
  • 77.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
7.04e3
  • 7.04e3
  • 1.08e4
76.42
  • 76.42
  • 63.76
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.15e3
  • 7.15e3
  • 7.66e3
  • 9.26e3
76.07
  • 76.07
  • 74.35
  • 68.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.33e3
  • 7.33e3
  • 8.55e3
75.46
  • 75.46
  • 71.38
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
7.41e3
  • 7.41e3
  • 9.40e3
  • 1.06e4
  • 1.10e4
  • 1.12e4
  • 1.13e4
75.18
  • 75.18
  • 68.51
  • 64.51
  • 63.24
  • 62.40
  • 62.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.55e3
  • 7.55e3
74.73
  • 74.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.70e3
  • 7.70e3
74.23
  • 74.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
  • 1.50e4
73.85
  • 73.85
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
7.92e3
  • 7.92e3
  • 8.23e3
  • 8.26e3
  • 8.30e3
  • 8.41e3
  • 8.71e3
  • 8.88e3
  • 8.94e3
  • 9.16e3
  • 9.16e3
  • 9.30e3
  • 9.40e3
  • 1.11e4
  • 1.37e4
  • 1.41e4
  • 1.49e4
73.49
  • 73.49
  • 72.43
  • 72.35
  • 72.22
  • 71.84
  • 70.82
  • 70.25
  • 70.08
  • 69.33
  • 69.33
  • 68.87
  • 68.53
  • 62.85
  • 54.18
  • 52.86
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000026Segmentation:14-19 somites
7.97e3
  • 7.97e3
73.32
  • 73.32
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.79e3
  • 8.79e3
  • 9.13e3
  • 9.71e3
70.57
  • 70.57
  • 69.43
  • 67.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
8.79e3
  • 8.79e3
70.57
  • 70.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.92e3
  • 8.92e3
  • 1.05e4
70.13
  • 70.13
  • 64.79
AEIR
  • AEIR
  • AEIR
UBERON:0006601presumptive ectoderm
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.05e4
  • 1.05e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
64.99
  • 64.99
  • 61.10
  • 61.10
  • 61.10
  • 61.10
  • 61.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
62.49
  • 62.49
  • 62.49
  • 59.08
  • 59.08
  • 59.08
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.50e4
55.82
  • 55.82
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.49e4
  • 1.49e4
  • 1.51e4
  • 1.57e4
49.97
  • 49.97
  • 49.40
  • 47.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.54e4
  • 1.54e4
48.44
  • 48.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000018593 (parp16)
ZFINZDB-GENE-040426-2289 (parp16)
EMBLBC067335, CU694372
Uniprot/SPTREMBLQ6NX05, Q6NX05_DANRE

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