D. rerio Gene: parp16 - ENSDARG00000018593 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018593
Nameparp16
Descriptionpoly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77744

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000151pectoral fin
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
2.47e3
  • 2.47e3
  • 6.91e3
  • 7.40e3
91.66836
  • 91.66836
  • 76.65821
  • 74.98984
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.38614
  • 87.38614
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.24756
  • 87.24756
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.90e3
  • 3.90e3
86.83859
  • 86.83859
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
85.96657
  • 85.96657
AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.93e3
  • 4.93e3
  • 4.93e3
83.33334
  • 83.33334
  • 83.33334
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
83.33024
  • 83.33024
AEIR
  • AEIR
UBERON:0001637artery
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.93e3
  • 4.93e3
  • 4.93e3
  • 5.69e3
  • 1.08e4
  • 1.08e4
83.32996
  • 83.32996
  • 83.32996
  • 80.76417
  • 63.62621
  • 63.62621
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.95e3
  • 4.95e3
83.26409
  • 83.26409
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
5.05e3
  • 5.05e3
  • 5.55e3
  • 7.40e3
  • 9.16e3
82.92324
  • 82.92324
  • 81.24324
  • 74.98984
  • 69.02902
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.66443
  • 82.66443
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
5.24e3
  • 5.24e3
  • 1.20e4
82.29911
  • 82.29911
  • 59.59010
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.54e3
  • 5.54e3
  • 7.41e3
81.28556
  • 81.28556
  • 74.94500
AEIR
  • AEIR
  • AEIR
UBERON:0001638vein
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.69e3
  • 5.69e3
  • 5.69e3
  • 6.91e3
  • 1.02e4
  • 1.02e4
80.76417
  • 80.76417
  • 80.76417
  • 76.65821
  • 65.60979
  • 65.60979
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.75e3
  • 5.75e3
80.57006
  • 80.57006
AEIR
  • AEIR
UBERON:2000040median fin fold
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.92e3
  • 5.92e3
  • 8.22e3
  • 9.25e3
  • 1.15e4
  • 1.15e4
80.00000
  • 80.00000
  • 72.21716
  • 68.74493
  • 61.10267
  • 61.10267
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.26e3
  • 6.26e3
  • 6.51e3
  • 7.11e3
  • 7.55e3
  • 7.77e3
  • 8.34e3
  • 8.44e3
  • 9.08e3
  • 9.18e3
  • 1.12e4
78.83162
  • 78.83162
  • 77.99550
  • 75.95863
  • 74.47822
  • 73.74022
  • 71.81583
  • 71.48892
  • 69.32270
  • 68.96279
  • 62.15331
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.29e3
  • 6.29e3
78.73270
  • 78.73270
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.08414
  • 77.08414
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.59067
  • 76.59067
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
6.99e3
  • 6.99e3
  • 1.07e4
76.36474
  • 76.36474
  • 63.76101
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.33e3
  • 7.33e3
  • 8.55e3
75.23533
  • 75.23533
  • 71.11623
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.49e3
  • 7.49e3
74.67883
  • 74.67883
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.64e3
  • 7.64e3
74.17535
  • 74.17535
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
  • 1.48e4
73.60815
  • 73.60815
  • 49.88846
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
7.86e3
  • 7.86e3
  • 8.18e3
  • 8.20e3
  • 8.24e3
  • 8.35e3
  • 8.65e3
  • 8.82e3
  • 8.87e3
  • 9.10e3
  • 9.10e3
  • 9.23e3
  • 9.33e3
  • 1.10e4
  • 1.36e4
  • 1.40e4
  • 1.47e4
73.42864
  • 73.42864
  • 72.36910
  • 72.29405
  • 72.15637
  • 71.78146
  • 70.76095
  • 70.18668
  • 70.01043
  • 69.26226
  • 69.25914
  • 68.80024
  • 68.46082
  • 62.77073
  • 54.17376
  • 52.76210
  • 50.19874
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000026Segmentation:14-19 somites
7.89e3
  • 7.89e3
73.32320
  • 73.32320
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.68e3
  • 8.68e3
  • 9.20e3
  • 1.11e4
70.67047
  • 70.67047
  • 68.92005
  • 62.51277
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.71e3
  • 8.71e3
  • 9.05e3
  • 9.62e3
70.57472
  • 70.57472
  • 69.42923
  • 67.48142
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
8.71e3
  • 8.71e3
70.57472
  • 70.57472
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
9.34e3
  • 9.34e3
  • 1.03e4
  • 1.05e4
  • 1.09e4
  • 1.13e4
68.44530
  • 68.44530
  • 65.04463
  • 64.43354
  • 63.15924
  • 61.97049
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
9.43e3
  • 9.43e3
  • 1.02e4
  • 1.04e4
68.12355
  • 68.12355
  • 65.59037
  • 65.00155
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.04e4
66.02635
  • 66.02635
  • 64.71613
AEIR
  • AEIR
  • AEIR
UBERON:0006601presumptive ectoderm
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.04e4
  • 1.04e4
  • 1.15e4
  • 1.15e4
  • 1.15e4
  • 1.15e4
  • 1.15e4
64.99153
  • 64.99153
  • 61.10267
  • 61.10267
  • 61.10267
  • 61.10267
  • 61.10267
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
1.11e4
  • 1.11e4
  • 1.11e4
  • 1.21e4
  • 1.21e4
  • 1.21e4
  • 1.23e4
62.48816
  • 62.48816
  • 62.48816
  • 59.07907
  • 59.07907
  • 59.07907
  • 58.31981
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
  • 1.48e4
55.82313
  • 55.82313
  • 49.93916
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
1.50e4
  • 1.50e4
49.28866
  • 49.28866
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC067335, CU694372
EnsemblENSDARG00000018593 (parp16)
Uniprot/SPTREMBLQ6NX05, Q6NX05_DANRE
ZFINZDB-GENE-040426-2289 (parp16)

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