D. rerio Gene: retsat - ENSDARG00000018600 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018600
Nameretsat
Descriptionretinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
OrganismDanio rerio (zebrafish)
Synonym(s)q6dbt4, wu:fd46d06, zgc:113107, zretsat a
Orthologs(s)17 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
927
  • 927
  • 1.28e4
96.90
  • 96.90
  • 57.13
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.47e3
  • 1.47e3
  • 4.55e3
95.09
  • 95.09
  • 84.77
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.94
  • 90.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.46e3
  • 3.46e3
88.43
  • 88.43
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.11
  • 88.11
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.52
  • 87.52
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.70e3
  • 4.70e3
  • 5.75e3
84.26
  • 84.26
  • 80.76
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.74e3
  • 4.74e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.98e3
  • 4.98e3
  • 5.96e3
  • 8.52e3
  • 1.04e4
  • 1.05e4
83.34
  • 83.34
  • 80.04
  • 71.46
  • 65.07
  • 64.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.04e3
  • 5.04e3
83.12
  • 83.12
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.44e3
  • 5.44e3
  • 1.04e4
81.80
  • 81.80
  • 65.04
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.72
  • 80.72
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.82e3
  • 5.82e3
  • 9.90e3
80.51
  • 80.51
  • 66.85
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.50
  • 80.50
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.58
  • 78.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.44
  • 77.44
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.15
  • 76.15
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
7.41e3
  • 7.41e3
  • 1.02e4
  • 1.04e4
  • 1.11e4
  • 1.12e4
  • 1.16e4
75.19
  • 75.19
  • 65.86
  • 65.18
  • 62.73
  • 62.43
  • 61.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.58e3
  • 7.58e3
74.61
  • 74.61
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
7.68e3
  • 7.68e3
  • 8.69e3
  • 8.90e3
  • 9.02e3
  • 9.10e3
  • 1.02e4
  • 1.05e4
  • 1.06e4
  • 1.10e4
  • 1.13e4
74.28
  • 74.28
  • 70.89
  • 70.20
  • 69.79
  • 69.54
  • 65.85
  • 64.68
  • 64.40
  • 63.02
  • 62.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.79e3
  • 7.79e3
  • 8.15e3
  • 9.89e3
73.93
  • 73.93
  • 72.70
  • 66.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000106zygote stage
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0004707pharyngula stage
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000036Larval:Day 4
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
8.81e3
  • 8.81e3
  • 1.03e4
  • 1.06e4
  • 1.10e4
  • 1.10e4
  • 1.14e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.24e4
  • 1.27e4
  • 1.29e4
  • 1.29e4
  • 1.30e4
  • 1.32e4
  • 1.32e4
  • 1.33e4
  • 1.34e4
  • 1.35e4
  • 1.35e4
  • 1.36e4
  • 1.38e4
  • 1.41e4
  • 1.43e4
  • 1.46e4
70.50
  • 70.50
  • 65.61
  • 64.42
  • 63.32
  • 63.01
  • 61.75
  • 59.08
  • 59.08
  • 59.08
  • 58.32
  • 58.32
  • 57.34
  • 56.65
  • 56.65
  • 56.43
  • 55.82
  • 55.66
  • 55.32
  • 55.26
  • 54.92
  • 54.81
  • 54.32
  • 53.89
  • 52.87
  • 52.27
  • 51.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
  • 9.71e3
  • 1.14e4
70.22
  • 70.22
  • 67.49
  • 61.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.14
  • 69.14
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.33e3
  • 9.33e3
68.75
  • 68.75
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.64e3
  • 9.64e3
67.73
  • 67.73
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.06e4
  • 1.06e4
64.43
  • 64.43
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.12e4
  • 1.50e4
64.28
  • 64.28
  • 62.49
  • 49.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.15e4
  • 1.15e4
61.49
  • 61.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Chordata2 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000018600.

Cross-references

EnsemblENSDARG00000018600 (retsat)
ZFINZDB-GENE-050320-11 (retsat)
EMBLBC078372, BC090469
Uniprot/SWISSPROTQ5BLE8, RETST_DANRE

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