D. rerio Gene: cers4b - ENSDARG00000018619 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018619
Namecers4b
Descriptionceramide synthase 4b [Source:ZFIN;Acc:ZDB-GENE-110719-2]
OrganismDanio rerio (zebrafish)
Orthologs(s)5 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.54e3
  • 1.54e3
  • 2.55e3
94.85
  • 94.85
  • 91.46
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.46e3
  • 4.46e3
  • 1.19e4
  • 1.22e4
85.05
  • 85.05
  • 59.99
  • 59.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.52
  • 81.52
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.67e3
  • 6.67e3
77.67
  • 77.67
AEIR
  • AEIR
UBERON:0002108small intestine
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.94e3
  • 7.94e3
  • 1.17e4
73.43
  • 73.43
  • 60.71
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
8.96e3
  • 8.96e3
  • 1.02e4
  • 1.44e4
  • 1.67e4
  • 1.82e4
69.99
  • 69.99
  • 65.86
  • 51.83
  • 44.20
  • 39.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.48
  • 62.48
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.34e4
  • 1.34e4
  • 1.49e4
54.97
  • 54.97
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.45e4
  • 1.45e4
51.47
  • 51.47
AEIR
  • AEIR
UBERON:0008896post-hyoid pharyngeal arch
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.28
  • 49.28
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.53e4
  • 1.53e4
  • 1.71e4
48.92
  • 48.92
  • 42.74
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.82
  • 47.82
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.59e4
  • 1.59e4
46.73
  • 46.73
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.63e4
  • 1.63e4
45.35
  • 45.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.85
  • 44.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.60
  • 43.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.36
  • 43.36
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.51
  • 41.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.04
  • 32.04
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.56
  • 28.56
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.26
  • 23.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria5 species5 genesCompare expression

Orthology information comes from OMA : ENSDARG00000018619.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression
Bilateria3 genesCompare expression
Eumetazoa7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000018619.

Cross-references

EnsemblENSDARG00000018619 (cers4b)
ZFINZDB-GENE-110719-2 (cers4b)
EMBLCU693374
Uniprot/SPTREMBLE7FCM3, E7FCM3_DANRE

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