D. rerio Gene: arl5a - ENSDARG00000018627 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018627
Namearl5a
DescriptionADP-ribosylation factor-like 5A [Source:ZFIN;Acc:ZDB-GENE-040718-28]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92193
Orthologs(s)26 orthologs
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.62e3
  • 2.62e3
91.23
  • 91.23
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.18e3
  • 4.18e3
  • 6.11e3
86.00
  • 86.00
  • 79.54
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
4.28e3
  • 4.28e3
  • 6.37e3
85.66
  • 85.66
  • 78.68
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.59e3
  • 4.59e3
84.62
  • 84.62
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
  • 9.13e3
84.27
  • 84.27
  • 69.44
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.74e3
  • 4.74e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.09e3
  • 5.09e3
  • 5.17e3
82.95
  • 82.95
  • 82.70
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.21e3
  • 5.21e3
  • 1.47e4
82.56
  • 82.56
  • 50.88
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.03
  • 82.03
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
5.39e3
  • 5.39e3
  • 6.42e3
  • 6.95e3
  • 7.72e3
  • 8.35e3
81.94
  • 81.94
  • 78.51
  • 76.74
  • 74.15
  • 72.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.43
  • 80.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
79.86
  • 79.86
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.17
  • 79.17
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.28
  • 78.28
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.61e3
  • 6.61e3
77.87
  • 77.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
76.18
  • 76.18
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
75.54
  • 75.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.33e3
  • 7.33e3
75.45
  • 75.45
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.47e3
  • 7.47e3
  • 9.94e3
75.00
  • 75.00
  • 66.72
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.58e3
  • 7.58e3
74.62
  • 74.62
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
8.75e3
  • 8.75e3
  • 1.25e4
  • 1.41e4
  • 1.44e4
  • 1.45e4
  • 1.46e4
  • 1.49e4
70.71
  • 70.71
  • 57.99
  • 52.63
  • 51.88
  • 51.57
  • 51.12
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
  • 1.46e4
67.17
  • 67.17
  • 51.07
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.14
  • 50.14
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.18
  • 38.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000018627.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000018627 (arl5a)
ZFINZDB-GENE-040718-28 (arl5a)
EMBLAL935048, BC075927, CR391905
Uniprot/SPTREMBLQ6DHP0, Q6DHP0_DANRE

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