D. rerio Gene: elk3 - ENSDARG00000018688 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018688
Nameelk3
DescriptionELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-172b12.2, si:dkey-201e17.1, zgc:198153, zgc:198183
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
  • 5.21e3
94.53
  • 94.53
  • 82.56
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.95
  • 91.95
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
89.55
  • 89.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
86.64
  • 86.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
85.25
  • 85.25
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.91e3
  • 5.91e3
80.21
  • 80.21
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.92e3
  • 6.92e3
  • 7.71e3
76.82
  • 76.82
  • 74.19
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
7.24e3
  • 7.24e3
  • 7.28e3
  • 7.46e3
  • 8.82e3
  • 1.11e4
75.74
  • 75.74
  • 75.64
  • 75.01
  • 70.49
  • 62.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.37e3
  • 7.37e3
75.33
  • 75.33
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.60e3
  • 8.60e3
  • 1.41e4
71.22
  • 71.22
  • 52.74
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.94e3
  • 8.94e3
70.08
  • 70.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.46e3
  • 9.46e3
68.31
  • 68.31
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.09
  • 68.09
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.82
  • 65.82
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.06e4
  • 1.06e4
64.38
  • 64.38
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.07e4
  • 1.07e4
  • 1.17e4
64.27
  • 64.27
  • 60.71
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.87
  • 62.87
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.92
  • 61.92
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.74
  • 58.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.65
  • 57.65
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
55.95
  • 55.95
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.92
  • 55.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.11
  • 50.11
AEIR
  • AEIR
UBERON:0004852cardiovascular system endothelium
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.57e4
  • 1.57e4
  • 1.78e4
47.43
  • 47.43
  • 40.36
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.63e4
  • 1.63e4
45.54
  • 45.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000018688 (elk3)
ZFINZDB-GENE-030716-2 (elk3)
EMBLBX537336, BX649411
Uniprot/SPTREMBLF1QIB0, F1QIB0_DANRE

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