Gene: klf18 - ENSDARG00000018757 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000018757
Name	klf18
Description	Kruppel-like factor 18 [Source:ZFIN;Acc:ZDB-GENE-060312-34]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:136851

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.30e3 2.30e3	92.29 92.29	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	2.69e3 2.69e3	91.01 91.01	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	2.92e3 2.92e3	90.22 90.22	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	5.57e3 5.57e3 1.34e4	81.34 81.34 55.20	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	6.94e3 6.94e3 8.35e3	76.75 76.75 72.04	AEIR AEIR AEIR
UBERON:0000061	anatomical structure	[+] 2 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000031Pharyngula:Prim-25	7.47e3 7.47e3 1.49e4	75.00 75.00 50.00	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000037Larval:Day 5	8.45e3 8.45e3 8.64e3 8.99e3 9.32e3 1.04e4	71.72 71.72 71.09 69.90 68.78 65.01	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	8.47e3 8.47e3	71.64 71.64	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	8.73e3 8.73e3 9.61e3	70.76 70.76 67.84	AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	9.26e3 9.26e3	69.01 69.01	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	9.47e3 9.47e3	68.29 68.29	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	9.83e3 9.83e3 1.18e4	67.09 67.09 60.51	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.94 64.94	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.07e4 1.07e4	64.29 64.29	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.21e4 1.21e4	59.47 59.47	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.28e4 1.28e4	57.01 57.01	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.43e4 1.43e4	52.14 52.14	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.49e4 1.49e4	50.19 50.19	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.56e4 1.56e4 2.18e4	47.65 47.65 27.04	AEIR AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.70e4 1.70e4	43.08 43.08	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.16e4 2.16e4	27.51 27.51	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.20e4 2.20e4	26.25 26.25	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

In situ hybridization data: ZFIN
RNA-Seq data: GEO

Cross-references

Ensembl	ENSDARG00000018757 (klf18)
ZFIN	ZDB-GENE-060312-34 (klf18)
EMBL	CU695200, KC293898
Uniprot/SPTREMBL	I3IS61, I3IS61_DANRE