D. rerio Gene: klf18 - ENSDARG00000018757 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018757
Nameklf18
DescriptionKruppel-like factor 18 [Source:ZFIN;Acc:ZDB-GENE-060312-34]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:136851

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
90.22
  • 90.22
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.57e3
  • 5.57e3
  • 1.34e4
81.34
  • 81.34
  • 55.20
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.94e3
  • 6.94e3
  • 8.35e3
76.75
  • 76.75
  • 72.04
AEIR
  • AEIR
  • AEIR
UBERON:0000061anatomical structure
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
8.45e3
  • 8.45e3
  • 8.64e3
  • 8.99e3
  • 9.32e3
  • 1.04e4
71.72
  • 71.72
  • 71.09
  • 69.90
  • 68.78
  • 65.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.47e3
  • 8.47e3
71.64
  • 71.64
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.73e3
  • 8.73e3
  • 9.61e3
70.76
  • 70.76
  • 67.84
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.26e3
  • 9.26e3
69.01
  • 69.01
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.47e3
  • 9.47e3
68.29
  • 68.29
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.83e3
  • 9.83e3
  • 1.18e4
67.09
  • 67.09
  • 60.51
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.94
  • 64.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
64.29
  • 64.29
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.47
  • 59.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.01
  • 57.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.14
  • 52.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.19
  • 50.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
  • 2.18e4
47.65
  • 47.65
  • 27.04
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.70e4
  • 1.70e4
43.08
  • 43.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.51
  • 27.51
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.25
  • 26.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000018757 (klf18)
ZFINZDB-GENE-060312-34 (klf18)
EMBLCU695200, KC293898
Uniprot/SPTREMBLI3IS61, I3IS61_DANRE

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