D. rerio Gene: nrarpb - ENSDARG00000018958 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018958
Namenrarpb
Descriptionnotch-regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
OrganismDanio rerio (zebrafish)
Synonym(s)nrarp-b, zgc:101875
Orthologs(s)12 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.03e3
  • 2.03e3
  • 2.53e3
  • 3.52e3
  • 3.77e3
  • 3.78e3
  • 3.96e3
  • 4.19e3
  • 5.02e3
  • 6.48e3
  • 1.07e4
  • 1.14e4
  • 1.29e4
  • 1.33e4
  • 1.39e4
  • 1.47e4
  • 1.48e4
93.21
  • 93.21
  • 91.53
  • 88.21
  • 87.37
  • 87.35
  • 86.73
  • 85.97
  • 83.20
  • 78.29
  • 64.30
  • 61.75
  • 56.71
  • 55.48
  • 53.33
  • 50.90
  • 50.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
2.98e3
  • 2.98e3
  • 3.06e3
  • 3.48e3
  • 4.07e3
  • 4.92e3
  • 4.93e3
  • 5.47e3
  • 5.66e3
  • 5.95e3
  • 1.44e4
90.02
  • 90.02
  • 89.74
  • 88.36
  • 86.37
  • 83.53
  • 83.50
  • 81.69
  • 81.07
  • 80.09
  • 51.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005068neural rod
  • ZFS:0000026Segmentation:14-19 somites
3.45e3
  • 3.45e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.91e3
  • 3.91e3
  • 6.11e3
  • 1.17e4
86.91
  • 86.91
  • 79.54
  • 60.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.36e3
  • 4.36e3
  • 4.40e3
  • 5.32e3
  • 5.98e3
  • 6.52e3
  • 7.80e3
85.39
  • 85.39
  • 85.28
  • 82.18
  • 79.99
  • 78.16
  • 73.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000026Segmentation:14-19 somites
4.98e3
  • 4.98e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
4.98e3
  • 4.98e3
83.32
  • 83.32
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
  • 1.35e4
82.79
  • 82.79
  • 54.90
AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
5.50e3
  • 5.50e3
  • 6.15e3
  • 6.15e3
  • 8.54e3
  • 8.96e3
  • 9.19e3
  • 9.60e3
81.57
  • 81.57
  • 79.40
  • 79.40
  • 71.42
  • 69.99
  • 69.22
  • 67.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.61e3
  • 5.61e3
81.20
  • 81.20
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.98e3
  • 5.98e3
  • 1.05e4
  • 1.10e4
79.99
  • 79.99
  • 64.98
  • 63.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.70
  • 78.70
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.73e3
  • 6.73e3
77.47
  • 77.47
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.18e3
  • 8.18e3
  • 9.38e3
72.60
  • 72.60
  • 68.60
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.29e3
  • 8.29e3
72.23
  • 72.23
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.83e3
  • 8.83e3
  • 1.11e4
70.44
  • 70.44
  • 62.77
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
9.04e3
  • 9.04e3
  • 1.28e4
69.73
  • 69.73
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
9.44e3
  • 9.44e3
  • 9.44e3
  • 9.96e3
68.40
  • 68.40
  • 68.40
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
9.61e3
  • 9.61e3
  • 1.20e4
  • 1.48e4
67.81
  • 67.81
  • 59.93
  • 50.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
9.70e3
  • 9.70e3
67.54
  • 67.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.87
  • 63.87
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.04
  • 63.04
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.77
  • 58.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.23e4
  • 1.23e4
  • 1.48e4
  • 1.67e4
58.69
  • 58.69
  • 50.40
  • 44.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.38
  • 58.38
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
1.30e4
  • 1.30e4
56.49
  • 56.49
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.70
  • 54.70
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
  • 1.50e4
54.33
  • 54.33
  • 49.64
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.75
  • 53.75
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.74
  • 53.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.39
  • 53.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.60
  • 49.60
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.41
  • 46.41
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.03
  • 40.03
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.89
  • 37.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.08
  • 37.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000018958.

Cross-references

EnsemblENSDARG00000018958 (nrarpb)
ZFINZDB-GENE-030515-7 (nrarpb)
EMBLAF509781, AY187048, BC085461, BC164916, FP340311
Uniprot/SPTREMBLB2GQY1, B2GQY1_DANRE
Uniprot/SWISSPROTNARPB_DANRE, Q7T3X9

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