D. rerio Gene: clptm1 - ENSDARG00000018973 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000018973
Nameclptm1
Descriptioncleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
OrganismDanio rerio (zebrafish)
Synonym(s)cb102, sb:cb102, zgc:100803

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.95e3
  • 1.95e3
  • 2.38e3
  • 2.51e3
  • 3.39e3
  • 3.69e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.54e3
  • 2.54e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.74e3
  • 2.74e3
  • 3.29e3
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.68e3
  • 3.68e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.31e3
  • 4.31e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
5.29e3
  • 5.29e3
  • 5.92e3
  • 9.58e3
  • 9.87e3
  • 1.02e4
  • 1.04e4
  • 1.06e4
  • 1.11e4
  • 1.13e4
  • 1.15e4
  • 1.15e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
6.48e3
  • 6.48e3
  • 6.58e3
  • 6.97e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.58e3
  • 9.58e3
  • 1.02e4
  • 1.04e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.04e4
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.23e4
  • 1.23e4
  • 1.30e4
  • 1.30e4
  • 1.33e4
  • 1.33e4
  • 1.40e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000026Segmentation:14-19 somites
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
1.40e4
  • 1.40e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX572630
EnsemblENSDARG00000018973 (clptm1)
Uniprot/SPTREMBLF1R5K1, F1R5K1_DANRE
ZFINZDB-GENE-040801-265 (clptm1)

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