D. rerio Gene: barhl1b - ENSDARG00000019013 - Danio rerio (zebrafish)

Gene Information

Ensembl IDENSDARG00000019013
Namebarhl1b
DescriptionBarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000104life cycle
993
  • 993
  • 1.21e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
  • 1.36e4
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
5.42e3
  • 5.42e3
  • 6.88e3
  • 1.21e4
  • 1.25e4
  • 1.34e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.42e3
  • 8.42e3
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
1.11e4
  • 1.11e4
  • 1.41e4
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
  • 1.45e4
AEIR
  • AEIR
  • AEIR
UBERON:2000633caudal tuberculum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
  • 1.32e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
1.27e4
  • 1.27e4
  • 1.29e4
  • 1.33e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
1.32e4
  • 1.32e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.35e4
  • 1.35e4
  • 1.37e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000022Gastrula:Bud
1.38e4
  • 1.38e4
AEIR
  • AEIR
UBERON:0001944pretectal region
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • ZFS:0000025Segmentation:10-13 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO