Gene: si:ch73-160i9.2 - ENSDARG00000019093 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000019093
Name	si:ch73-160i9.2
Description	si:ch73-160i9.2 [Source:ZFIN;Acc:ZDB-GENE-130530-564]
Organism	Danio rerio (zebrafish)
Synonym(s)	zmp:0000000561
Orthologs(s)	1 orthologs
Paralog(s)	4 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.63e4 1.63e4	45.57 45.57	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.64e4 1.64e4	45.05 45.05	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.67e4 1.67e4	44.24 44.24	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.73e4 1.73e4	42.05 42.05	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.87e4 1.87e4	37.38 37.38	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.92e4 1.92e4	35.68 35.68	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.98e4 1.98e4	33.70 33.70	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.17e4 2.17e4	27.22 27.22	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.23e4 2.23e4	25.26 25.26	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.37e4 2.37e4 2.43e4	20.60 20.60 18.63	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	2.65e4 2.65e4 2.77e4	11.32 11.32 7.41	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	1 species Anolis carolinensis (green anole)	1 gene ENSACAG00000004373	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000019093.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Neopterygii	3 genes ENSDARG00000058547 si:ch73-160i9.3 ENSDARG00000063111 si:ch73-160i9.1 ENSDARG00000076574 si:ch211-171h4.6	Compare expression	[+]
Euteleostomi	4 genes ENSDARG00000036728 si:dkey-211g8.1 ENSDARG00000058547 si:ch73-160i9.3 ENSDARG00000063111 si:ch73-160i9.1 ENSDARG00000076574 si:ch211-171h4.6	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000019093.

Cross-references

Ensembl	ENSDARG00000019093 (si:ch73-160i9.2)
ZFIN	ZDB-GENE-130530-564 (si:ch73-160i9.2)
Uniprot/SPTREMBL	E7EYK4, E7EYK4_DANRE