D. rerio Gene: sh3bp5la - ENSDARG00000019160 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019160
Namesh3bp5la
DescriptionSH3-binding domain protein 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-2187]
OrganismDanio rerio (zebrafish)
Synonym(s)kiaa1720a, wu:fb57h06, wu:fe18g01, zgc:63903

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.55
  • 96.55
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.32e3
  • 1.32e3
95.59
  • 95.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
1.73e3
  • 1.73e3
  • 3.88e3
  • 4.55e3
  • 4.94e3
  • 7.75e3
94.21
  • 94.21
  • 87.02
  • 84.78
  • 83.45
  • 74.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.35e3
  • 3.35e3
88.80
  • 88.80
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
3.39e3
  • 3.39e3
  • 9.58e3
  • 9.71e3
  • 9.78e3
  • 1.03e4
  • 1.10e4
  • 1.19e4
  • 1.23e4
  • 1.34e4
  • 1.34e4
  • 1.37e4
  • 1.42e4
  • 1.46e4
  • 1.49e4
88.66
  • 88.66
  • 67.93
  • 67.50
  • 67.26
  • 65.57
  • 63.28
  • 60.14
  • 58.69
  • 55.24
  • 55.23
  • 54.04
  • 52.50
  • 50.96
  • 50.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.04e3
  • 5.04e3
83.14
  • 83.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.29e3
  • 5.29e3
82.28
  • 82.28
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
5.98e3
  • 5.98e3
  • 6.22e3
  • 6.40e3
  • 6.89e3
  • 6.97e3
  • 6.97e3
  • 7.97e3
  • 8.54e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
79.99
  • 79.99
  • 79.16
  • 78.56
  • 76.92
  • 76.66
  • 76.66
  • 73.32
  • 71.41
  • 70.57
  • 70.57
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 69.43
  • 67.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.29e3
  • 6.29e3
  • 1.29e4
78.94
  • 78.94
  • 56.77
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.69
  • 78.69
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.44e3
  • 6.44e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.59
  • 76.59
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.28e3
  • 7.28e3
  • 1.02e4
75.62
  • 75.62
  • 66.01
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.97
  • 74.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
74.71
  • 74.71
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
7.69e3
  • 7.69e3
  • 8.34e3
  • 8.64e3
  • 8.90e3
  • 9.70e3
  • 1.01e4
74.24
  • 74.24
  • 72.09
  • 71.07
  • 70.19
  • 67.53
  • 66.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
7.83e3
  • 7.83e3
  • 1.07e4
  • 1.23e4
  • 1.30e4
73.78
  • 73.78
  • 64.32
  • 58.93
  • 56.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
72.89
  • 72.89
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.20e3
  • 8.20e3
72.53
  • 72.53
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.35e3
  • 8.35e3
72.06
  • 72.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
70.24
  • 70.24
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.92
  • 69.92
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.05e3
  • 9.05e3
69.69
  • 69.69
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.11e3
  • 9.11e3
69.49
  • 69.49
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
9.43e3
  • 9.43e3
  • 9.59e3
  • 9.61e3
  • 1.00e4
  • 1.01e4
  • 1.20e4
  • 1.32e4
  • 1.33e4
  • 1.36e4
  • 1.43e4
68.42
  • 68.42
  • 67.88
  • 67.81
  • 66.47
  • 66.24
  • 59.95
  • 55.74
  • 55.42
  • 54.47
  • 52.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.61e3
  • 9.61e3
67.84
  • 67.84
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.02e4
  • 1.02e4
  • 1.24e4
  • 1.41e4
65.70
  • 65.70
  • 58.50
  • 52.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
64.99
  • 64.99
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
64.82
  • 64.82
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.06e4
  • 1.06e4
64.51
  • 64.51
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.07e4
  • 1.07e4
64.18
  • 64.18
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000026Segmentation:14-19 somites
1.12e4
  • 1.12e4
62.48
  • 62.48
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.41e4
  • 1.41e4
  • 1.48e4
52.83
  • 52.83
  • 50.50
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX629344
EnsemblENSDARG00000019160 (sh3bp5la)
Uniprot/SPTREMBLF1R9K7, F1R9K7_DANRE
ZFINZDB-GENE-040426-2187 (sh3bp5la)

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