D. rerio Gene: lrit1a - ENSDARG00000019179 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019179
Namelrit1a
Descriptionleucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
OrganismDanio rerio (zebrafish)
Synonym(s)lrit1, lrrc21, zgc:112140

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
  • 7.01e3
76.57976
  • 76.57976
  • 76.31014
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
9.99e3
  • 9.99e3
66.23345
  • 66.23345
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.37314
  • 31.37314
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX855592
EnsemblENSDARG00000019179 (lrit1a)
Uniprot/SPTREMBLB8A5X5, B8A5X5_DANRE
ZFINZDB-GENE-040924-5 (lrit1a)

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