D. rerio Gene: CTBP1 - ENSDARG00000019213 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019213
NameCTBP1
Descriptionzgc:136929 [Source:ZFIN;Acc:ZDB-GENE-060421-4235]
OrganismDanio rerio (zebrafish)
Synonym(s)bars, fa96d06, wu:fa96d06
Orthologs(s)22 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.40e3
  • 1.40e3
  • 3.71e3
95.31
  • 95.31
  • 87.59
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.10e3
  • 2.10e3
  • 2.80e3
  • 3.04e3
  • 3.48e3
  • 3.79e3
  • 3.95e3
  • 4.44e3
  • 4.68e3
  • 6.64e3
  • 6.67e3
  • 7.23e3
  • 7.89e3
  • 8.15e3
  • 9.18e3
92.98
  • 92.98
  • 90.63
  • 89.81
  • 88.34
  • 87.32
  • 86.77
  • 85.12
  • 84.32
  • 77.78
  • 77.66
  • 75.79
  • 73.59
  • 72.73
  • 69.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.16e3
  • 2.16e3
92.79
  • 92.79
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.82e3
  • 2.82e3
  • 4.95e3
90.56
  • 90.56
  • 83.43
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
2.87e3
  • 2.87e3
  • 3.01e3
  • 4.91e3
  • 6.38e3
  • 6.72e3
  • 6.72e3
  • 7.08e3
  • 7.86e3
  • 1.05e4
  • 1.13e4
90.40
  • 90.40
  • 89.93
  • 83.58
  • 78.63
  • 77.51
  • 77.50
  • 76.28
  • 73.68
  • 64.82
  • 62.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.54
  • 89.54
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
87.13
  • 87.13
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.02e3
  • 4.02e3
  • 4.52e3
  • 5.62e3
86.55
  • 86.55
  • 84.86
  • 81.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.07e3
  • 4.07e3
  • 6.14e3
  • 6.68e3
  • 8.19e3
86.39
  • 86.39
  • 79.43
  • 77.65
  • 72.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
  • 4.91e3
86.39
  • 86.39
  • 83.58
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.26e3
  • 4.26e3
  • 6.12e3
85.74
  • 85.74
  • 79.51
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.98
  • 84.98
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.53
  • 83.53
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.15e3
  • 5.15e3
82.74
  • 82.74
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.48
  • 81.48
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.90e3
  • 5.90e3
80.26
  • 80.26
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.91e3
  • 5.91e3
80.22
  • 80.22
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.06e3
  • 6.06e3
79.72
  • 79.72
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.07e3
  • 6.07e3
79.66
  • 79.66
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
79.05
  • 79.05
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
6.42e3
  • 6.42e3
  • 6.48e3
  • 8.43e3
  • 8.61e3
  • 8.74e3
78.51
  • 78.51
  • 78.32
  • 71.78
  • 71.18
  • 70.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.56e3
  • 6.56e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.26
  • 77.26
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.88e3
  • 6.88e3
76.98
  • 76.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.40e3
  • 7.40e3
75.22
  • 75.22
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.53e3
  • 7.53e3
74.79
  • 74.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.49
  • 73.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.26
  • 73.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.11e3
  • 8.11e3
72.83
  • 72.83
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
8.38e3
  • 8.38e3
  • 9.05e3
  • 1.02e4
  • 1.10e4
  • 1.10e4
  • 1.16e4
71.94
  • 71.94
  • 69.68
  • 65.76
  • 63.31
  • 63.05
  • 61.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.80e3
  • 8.80e3
70.52
  • 70.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000019213.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000019213.

Cross-references

EnsemblENSDARG00000019213 (CTBP1)
HGNCHGNC:2494 (CTBP1)
ZFINZDB-GENE-060421-4235 (zgc:136929)
EMBLBC115334, BX470131
Uniprot/SPTREMBLQ1RLQ4, Q1RLQ4_DANRE

Do not show this banner again