D. rerio Gene: spna2 - ENSDARG00000019231 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019231
Namespna2
Descriptionspectrin alpha 2 [Source:ZFIN;Acc:ZDB-GENE-051113-60]
OrganismDanio rerio (zebrafish)
Synonym(s)alpha2 spectrin, im:7157190, wu:fa20e05, wu:fb33g08, wu:fk32a10, zgc:112229
Orthologs(s)24 orthologs
Paralog(s)50 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
384
  • 384
  • 921
98.72
  • 98.72
  • 96.92
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
473
  • 473
  • 1.63e3
  • 6.79e3
  • 8.15e3
  • 1.34e4
  • 1.45e4
98.42
  • 98.42
  • 94.53
  • 77.27
  • 72.72
  • 54.99
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000106zygote stage
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0004707pharyngula stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000104life cycle
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000068embryo stage
478
  • 478
  • 623
  • 721
  • 729
  • 758
  • 766
  • 777
  • 779
  • 863
  • 924
  • 974
  • 1.01e3
  • 1.10e3
  • 5.21e3
  • 6.03e3
  • 6.40e3
  • 6.54e3
  • 8.30e3
  • 8.79e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.67e3
  • 9.96e3
  • 9.96e3
  • 1.10e4
  • 1.11e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.29e4
  • 1.29e4
  • 1.40e4
98.40
  • 98.40
  • 97.92
  • 97.59
  • 97.56
  • 97.46
  • 97.44
  • 97.40
  • 97.40
  • 97.11
  • 96.91
  • 96.74
  • 96.61
  • 96.32
  • 82.55
  • 79.81
  • 78.56
  • 78.12
  • 72.21
  • 70.58
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 67.63
  • 66.66
  • 66.66
  • 63.32
  • 62.68
  • 59.08
  • 59.08
  • 59.08
  • 56.65
  • 56.65
  • 53.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
618
  • 618
97.93
  • 97.93
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
621
  • 621
  • 650
  • 809
  • 826
  • 890
  • 1.73e3
97.93
  • 97.93
  • 97.83
  • 97.29
  • 97.24
  • 97.02
  • 94.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
628
  • 628
  • 727
  • 883
  • 964
  • 1.03e3
  • 1.20e3
  • 1.26e3
  • 1.29e3
  • 2.44e3
  • 3.32e3
97.90
  • 97.90
  • 97.57
  • 97.05
  • 96.78
  • 96.55
  • 95.98
  • 95.77
  • 95.68
  • 91.82
  • 88.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
647
  • 647
  • 2.06e3
  • 1.21e4
97.84
  • 97.84
  • 93.10
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
650
  • 650
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
672
  • 672
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
706
  • 706
97.64
  • 97.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
724
  • 724
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
732
  • 732
  • 804
  • 827
97.55
  • 97.55
  • 97.31
  • 97.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
819
  • 819
97.26
  • 97.26
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
978
  • 978
  • 1.66e3
  • 1.94e3
  • 2.86e3
96.73
  • 96.73
  • 94.46
  • 93.49
  • 90.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
998
  • 998
96.66
  • 96.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.34
  • 96.34
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.15e3
  • 1.15e3
96.15
  • 96.15
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.21e3
  • 1.21e3
  • 3.31e3
95.94
  • 95.94
  • 88.93
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.44
  • 95.44
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.37
  • 95.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
  • 1.50e4
95.26
  • 95.26
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.10
  • 95.10
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.93
  • 94.93
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.66e3
  • 1.66e3
94.44
  • 94.44
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.01
  • 94.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.69
  • 92.69
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
2.35e3
  • 2.35e3
  • 2.36e3
  • 2.39e3
  • 2.43e3
  • 5.76e3
92.13
  • 92.13
  • 92.11
  • 92.00
  • 91.88
  • 80.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.88e3
  • 2.88e3
  • 1.45e4
90.35
  • 90.35
  • 51.36
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.02e3
  • 7.02e3
76.49
  • 76.49
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.96e3
  • 7.96e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
7.97e3
  • 7.97e3
  • 8.96e3
73.32
  • 73.32
  • 69.98
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.59
  • 70.59
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.42
  • 70.42
AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
1.31e4
  • 1.31e4
  • 1.39e4
  • 1.49e4
56.23
  • 56.23
  • 53.55
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
  • 1.37e4
54.99
  • 54.99
  • 54.15
AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.47e4
54.99
  • 54.99
  • 50.86
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.37e4
  • 1.37e4
  • 1.38e4
  • 1.48e4
54.15
  • 54.15
  • 53.89
  • 50.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001314posterior lateral line ganglion
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2001391anterior lateral line ganglion
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000019231.

Paralogs (same species)

Cross-references

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