D. rerio Gene: mid1ip1b - ENSDARG00000019302 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019302
Namemid1ip1b
DescriptionMID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
OrganismDanio rerio (zebrafish)
Synonym(s)q6p955, zgc:73223
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
724
  • 724
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.38
  • 95.38
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
1.64e3
  • 1.64e3
  • 3.03e3
  • 3.31e3
  • 4.03e3
  • 5.57e3
  • 5.78e3
  • 6.41e3
  • 7.47e3
  • 7.66e3
  • 7.74e3
  • 8.37e3
  • 8.56e3
  • 1.02e4
  • 1.03e4
  • 1.15e4
94.52
  • 94.52
  • 89.85
  • 88.92
  • 86.49
  • 81.36
  • 80.65
  • 78.54
  • 74.99
  • 74.37
  • 74.10
  • 71.96
  • 71.34
  • 65.88
  • 65.43
  • 61.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
94.15
  • 94.15
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.79e3
  • 1.79e3
  • 7.99e3
94.01
  • 94.01
  • 73.25
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
  • 2.48e3
93.99
  • 93.99
  • 91.70
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
2.06e3
  • 2.06e3
  • 2.44e3
  • 4.34e3
  • 8.90e3
93.10
  • 93.10
  • 91.83
  • 85.46
  • 70.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
2.29e3
  • 2.29e3
  • 5.43e3
  • 1.22e4
  • 1.31e4
  • 1.34e4
92.34
  • 92.34
  • 81.83
  • 59.08
  • 56.24
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
2.56e3
  • 2.56e3
  • 5.98e3
  • 8.74e3
  • 8.90e3
  • 9.14e3
  • 1.10e4
  • 1.13e4
  • 1.19e4
  • 1.30e4
  • 1.31e4
91.44
  • 91.44
  • 79.97
  • 70.74
  • 70.21
  • 69.40
  • 63.05
  • 62.29
  • 60.14
  • 56.44
  • 56.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.70e3
  • 2.70e3
90.97
  • 90.97
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.79e3
  • 2.79e3
  • 3.45e3
  • 4.03e3
90.65
  • 90.65
  • 88.45
  • 86.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.79
  • 88.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.76e3
  • 4.76e3
84.07
  • 84.07
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.91e3
  • 4.91e3
83.57
  • 83.57
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.94
  • 82.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.48
  • 82.48
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
82.43
  • 82.43
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.38
  • 81.38
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.41
  • 76.41
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
  • 8.24e3
76.18
  • 76.18
  • 72.40
AEIR
  • AEIR
  • AEIR
UBERON:0008906lateral line nerve
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.70
  • 74.70
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.81e3
  • 7.81e3
73.84
  • 73.84
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
9.39e3
  • 9.39e3
  • 1.05e4
  • 1.07e4
  • 1.18e4
  • 1.23e4
  • 1.40e4
68.55
  • 68.55
  • 64.70
  • 64.04
  • 60.64
  • 58.69
  • 53.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.67e3
  • 9.67e3
  • 9.96e3
  • 1.05e4
67.63
  • 67.63
  • 66.65
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
9.96e3
  • 9.96e3
  • 1.17e4
  • 1.27e4
  • 1.27e4
66.66
  • 66.66
  • 60.68
  • 57.47
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.10e4
  • 1.10e4
63.16
  • 63.16
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.60
  • 62.60
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.23e4
  • 1.23e4
  • 1.25e4
  • 1.39e4
58.93
  • 58.93
  • 58.12
  • 53.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.29e4
  • 1.29e4
  • 1.36e4
  • 1.37e4
  • 1.39e4
56.65
  • 56.65
  • 54.53
  • 54.15
  • 53.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.32e4
  • 1.32e4
55.69
  • 55.69
AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
1.37e4
  • 1.37e4
  • 1.37e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
54.15
  • 54.15
  • 54.15
  • 49.98
  • 49.98
  • 49.98
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000029Pharyngula:Prim-5
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.73
  • 52.73
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.46e4
  • 1.46e4
51.12
  • 51.12
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000019302.

Cross-references

EnsemblENSDARG00000019302 (mid1ip1b)
ZFINZDB-GENE-040426-1720 (mid1ip1b)
EMBLBC060921, BX927146
Uniprot/SWISSPROTM1I1B_DANRE, Q1LUV9

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