D. rerio Gene: rab39ba - ENSDARG00000019312 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019312
Namerab39ba
DescriptionRAB39B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-070620-7]
OrganismDanio rerio (zebrafish)
Synonym(s)tmem230, tmem230 {eco:0000313|ensembl:ensdarp00000020538,gn eco:0000313|zfin:zdb-gene-070620-7}, zgc:165464

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.33e3
  • 3.33e3
88.85
  • 88.85
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.64e3
  • 4.64e3
84.45
  • 84.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.53
  • 76.53
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
7.64e3
  • 7.64e3
  • 8.32e3
  • 1.33e4
  • 1.37e4
  • 1.40e4
74.41
  • 74.41
  • 72.15
  • 55.46
  • 54.05
  • 53.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.61e3
  • 8.61e3
71.16
  • 71.16
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.06e3
  • 9.06e3
  • 1.06e4
69.67
  • 69.67
  • 64.50
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.09
  • 60.09
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.41
  • 34.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.48
  • 25.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
24.12
  • 24.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.45e4
  • 2.45e4
18.06
  • 18.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC142804, CT025910
EnsemblENSDARG00000019312 (rab39ba)
Uniprot/SPTREMBLA5PLA1, A5PLA1_DANRE
ZFINZDB-GENE-070620-7 (rab39ba)

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