D. rerio Gene: sparc - ENSDARG00000019353 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019353
Namesparc
Descriptionsecreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
OrganismDanio rerio (zebrafish)
Synonym(s)hm:zeh0062, osn, osteonectin

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
163
  • 163
  • 320
99.45118
  • 99.45118
  • 98.92241
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
171
  • 171
99.42697
  • 99.42697
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
199
  • 199
  • 304
  • 420
  • 588
  • 694
  • 722
  • 724
  • 5.51e3
  • 7.51e3
  • 7.55e3
  • 1.02e4
  • 1.13e4
  • 1.19e4
  • 1.22e4
  • 1.23e4
99.33067
  • 99.33067
  • 98.97655
  • 98.58361
  • 98.01621
  • 97.65709
  • 97.56255
  • 97.55596
  • 81.39435
  • 74.62936
  • 74.49367
  • 65.48748
  • 61.68428
  • 59.78680
  • 58.75592
  • 58.53849
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
208
  • 208
99.30036
  • 99.30036
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
214
  • 214
  • 479
99.28008
  • 99.28008
  • 98.38420
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
228
  • 228
  • 237
  • 295
  • 351
  • 431
  • 486
  • 773
  • 2.13e3
  • 6.53e3
  • 7.19e3
99.23276
  • 99.23276
  • 99.20298
  • 99.00630
  • 98.81544
  • 98.54636
  • 98.36158
  • 97.39016
  • 92.78759
  • 77.94457
  • 75.70392
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
274
  • 274
99.07728
  • 99.07728
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
301
  • 301
98.98602
  • 98.98602
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
365
  • 365
  • 398
  • 420
98.76900
  • 98.76900
  • 98.65682
  • 98.58348
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
406
  • 406
98.63117
  • 98.63117
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
500
  • 500
98.31342
  • 98.31342
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
578
  • 578
  • 3.22e3
  • 1.40e4
98.05008
  • 98.05008
  • 89.12819
  • 52.72371
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
965
  • 965
  • 6.83e3
96.74223
  • 96.74223
  • 76.91007
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
96.18069
  • 96.18069
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.29882
  • 95.29882
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.90e3
  • 1.90e3
93.58244
  • 93.58244
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.14e3
  • 2.14e3
92.77711
  • 92.77711
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.43e3
  • 2.43e3
91.79173
  • 91.79173
AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
4.93e3
  • 4.93e3
  • 8.33e3
  • 9.87e3
  • 1.02e4
  • 1.02e4
  • 1.11e4
  • 1.48e4
83.33503
  • 83.33503
  • 71.86318
  • 66.65652
  • 65.37279
  • 65.37279
  • 62.48816
  • 49.98648
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
77.96509
  • 77.96509
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
  • 6.93e3
  • 8.83e3
77.45876
  • 77.45876
  • 76.57569
  • 70.14261
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001069ventral fin fold
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.40e3
  • 7.40e3
  • 1.48e4
75.00167
  • 75.00167
  • 49.99662
AEIR
  • AEIR
  • AEIR
UBERON:2001280branchiostegal ray 3
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
7.40e3
  • 7.40e3
  • 7.40e3
75.00167
  • 75.00167
  • 75.00167
AEIR
  • AEIR
  • AEIR
UBERON:0004741cleithrum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
7.40e3
  • 7.40e3
  • 9.42e3
  • 1.11e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
74.99322
  • 74.99322
  • 68.17336
  • 62.49830
  • 49.99831
  • 49.99662
  • 49.99662
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
8.17e3
  • 8.17e3
  • 8.75e3
  • 9.25e3
  • 1.07e4
  • 1.36e4
72.38142
  • 72.38142
  • 70.43594
  • 68.72803
  • 63.76101
  • 54.13286
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000039Larval:Days 7-13
8.88e3
  • 8.88e3
  • 9.11e3
  • 9.25e3
  • 9.42e3
  • 9.42e3
  • 9.48e3
  • 9.58e3
  • 9.62e3
  • 9.87e3
  • 1.48e4
69.98310
  • 69.98310
  • 69.22062
  • 68.73648
  • 68.16153
  • 68.16153
  • 67.97634
  • 67.63186
  • 67.48142
  • 66.65652
  • 50.00169
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0011610ceratohyal cartilage
  • ZFS:0000035Larval:Protruding-mouth
9.25e3
  • 9.25e3
68.74493
  • 68.74493
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
9.35e3
  • 9.35e3
  • 1.11e4
68.40414
  • 68.40414
  • 62.48816
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.44e3
  • 9.44e3
68.09315
  • 68.09315
AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.58e3
  • 9.58e3
  • 1.04e4
  • 1.11e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
  • 1.20e4
67.63186
  • 67.63186
  • 64.68900
  • 62.47802
  • 62.47802
  • 61.88109
  • 61.74610
  • 59.35640
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.58e3
  • 9.58e3
  • 9.87e3
  • 9.87e3
67.63186
  • 67.63186
  • 66.65314
  • 66.65314
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
9.86e3
  • 9.86e3
  • 1.20e4
  • 1.27e4
  • 1.27e4
66.66666
  • 66.66666
  • 59.35640
  • 57.13609
  • 57.12595
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016631actinopterygian frontal-parietal joint
  • ZFS:0000043Juvenile:Days 45-89
9.86e3
  • 9.86e3
66.66666
  • 66.66666
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000036Larval:Day 4
9.87e3
  • 9.87e3
  • 1.01e4
  • 1.03e4
  • 1.04e4
  • 1.06e4
  • 1.11e4
  • 1.13e4
  • 1.14e4
  • 1.48e4
66.63624
  • 66.63624
  • 65.77088
  • 65.19372
  • 64.97970
  • 64.28063
  • 62.47802
  • 61.88109
  • 61.33828
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.65937
  • 65.65937
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.06e4
  • 1.06e4
  • 1.22e4
  • 1.27e4
  • 1.35e4
  • 1.74e4
64.19097
  • 64.19097
  • 58.78735
  • 56.98396
  • 54.20942
  • 41.29630
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000035Larval:Protruding-mouth
1.11e4
  • 1.11e4
62.49830
  • 62.49830
AEIR
  • AEIR
UBERON:2000250opercle
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000034Hatching:Pec-fin
1.11e4
  • 1.11e4
  • 1.18e4
  • 1.48e4
  • 1.48e4
62.49830
  • 62.49830
  • 59.99662
  • 50.00000
  • 49.99662
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2005316fin fold pectoral fin bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.11e4
  • 1.11e4
  • 1.21e4
62.48816
  • 62.48816
  • 59.07907
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.13e4
62.41720
  • 62.41720
  • 61.79646
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.22e4
  • 1.23e4
  • 1.23e4
  • 1.48e4
61.88109
  • 61.88109
  • 58.80324
  • 58.31136
  • 58.31136
  • 49.96620
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.13e4
  • 1.13e4
  • 1.13e4
61.74610
  • 61.74610
  • 61.74610
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
60.07345
  • 60.07345
AEIR
  • AEIR
UBERON:0005421pectoral appendage apical ectodermal ridge
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
  • 1.21e4
59.07907
  • 59.07907
  • 59.07907
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.56080
  • 58.56080
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
  • ZFS:0000039Larval:Days 7-13
1.43e4
  • 1.43e4
  • 1.48e4
51.76736
  • 51.76736
  • 50.00169
AEIR
  • AEIR
  • AEIR
UBERON:0004753scapulocoracoid
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0010323cranial skeletal system
  • ZFS:0000034Hatching:Pec-fin
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0011085palatoquadrate arch
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:2000558posterior macula
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:2001522hypobranchial cartilage
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0001840semicircular canal
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
50.00000
  • 50.00000
AEIR
  • AEIR
UBERON:0002397maxilla
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
50.00000
  • 50.00000
  • 49.99662
AEIR
  • AEIR
  • AEIR
UBERON:0004742dentary
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
50.00000
  • 50.00000
  • 50.00000
  • 49.99831
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007390pectoral appendage cartilage tissue
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
50.00000
  • 50.00000
AEIR
  • AEIR
UBERON:2000657entopterygoid
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
50.00000
  • 50.00000
  • 50.00000
  • 49.99831
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003107Meckel's cartilage
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
49.99662
  • 49.99662
AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
49.97634
  • 49.97634
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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