D. rerio Gene: KRT23 - ENSDARG00000019365 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019365
NameKRT23
Descriptionzgc:110712 [Source:ZFIN;Acc:ZDB-GENE-050417-50]
OrganismDanio rerio (zebrafish)
Synonym(s)ck23, dkfzp434g032, haik1, k23, krtt1c11c, mgc26158, sb:cb640, wu:fb18a12, wu:fb49c09

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
309
  • 309
  • 457
  • 481
  • 899
  • 953
  • 1.27e3
98.97
  • 98.97
  • 98.47
  • 98.39
  • 96.99
  • 96.81
  • 95.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
  • UBERON:0000109gastrula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
337
  • 337
  • 339
  • 399
  • 541
  • 912
  • 1.60e3
  • 5.11e3
  • 9.87e3
  • 1.13e4
  • 1.15e4
  • 1.18e4
  • 1.19e4
  • 1.20e4
  • 1.21e4
  • 1.32e4
  • 1.41e4
98.88
  • 98.88
  • 98.87
  • 98.67
  • 98.19
  • 96.95
  • 94.65
  • 82.90
  • 66.95
  • 62.10
  • 61.37
  • 60.32
  • 60.00
  • 59.71
  • 59.35
  • 55.92
  • 52.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
493
  • 493
  • 506
  • 680
  • 1.72e3
  • 2.84e3
  • 3.48e3
  • 9.77e3
  • 1.32e4
  • 1.52e4
  • 1.68e4
98.35
  • 98.35
  • 98.31
  • 97.73
  • 94.26
  • 90.48
  • 88.34
  • 67.29
  • 55.96
  • 49.04
  • 43.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.03e3
  • 3.03e3
89.87
  • 89.87
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.34e3
  • 5.34e3
  • 5.37e3
82.13
  • 82.13
  • 82.03
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
6.90e3
  • 6.90e3
  • 7.83e3
  • 1.55e4
76.91
  • 76.91
  • 73.78
  • 47.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
  • 2.41e4
74.12
  • 74.12
  • 19.47
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.16e3
  • 9.16e3
69.32
  • 69.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.13
  • 68.13
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.66e3
  • 9.66e3
67.66
  • 67.66
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.01e4
  • 1.01e4
66.23
  • 66.23
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.04e4
  • 1.04e4
  • 1.22e4
  • 1.47e4
65.11
  • 65.11
  • 58.99
  • 50.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
  • 1.55e4
56.01
  • 56.01
  • 48.02
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.74
  • 55.74
AEIR
  • AEIR
UBERON:0004879marginal zone of embryo
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000016Blastula:30%-epiboly
1.34e4
  • 1.34e4
  • 1.49e4
55.24
  • 55.24
  • 49.98
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.37e4
  • 1.37e4
54.24
  • 54.24
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
  • 1.51e4
52.67
  • 52.67
  • 49.46
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.45e4
  • 1.45e4
51.58
  • 51.58
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.12
  • 51.12
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.42
  • 45.42
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.83e4
  • 1.83e4
  • 2.11e4
38.66
  • 38.66
  • 29.23
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.68
  • 23.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000019365 (KRT23)
HGNCHGNC:6438 (KRT23)
ZFINZDB-GENE-050417-50 (zgc:110712)
EMBLCR556712, CR848827
Uniprot/SPTREMBLA5WUY5, A5WUY5_DANRE

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