D. rerio Gene: stat5a - ENSDARG00000019392 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019392
Namestat5a
Descriptionsignal transducer and activator of transcription 5a [Source:ZFIN;Acc:ZDB-GENE-030820-2]
OrganismDanio rerio (zebrafish)
Synonym(s)stat5, stat5.1, stat5.1 {eco:0000313|embl:aai62592.1,gn eco:0000313|ensembl:ensdarp00000022542,gn eco:0000313|zf, stat5b
Orthologs(s)34 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.31e3
  • 1.31e3
95.61
  • 95.61
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.12
  • 86.12
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.40e3
  • 5.40e3
81.92
  • 81.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
74.89
  • 74.89
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.63e3
  • 8.63e3
71.10
  • 71.10
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
70.49
  • 70.49
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.86e3
  • 8.86e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.35e3
  • 9.35e3
68.70
  • 68.70
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
9.96e3
  • 9.96e3
  • 1.25e4
  • 1.31e4
66.67
  • 66.67
  • 58.31
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
1.03e4
  • 1.03e4
  • 1.10e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.29e4
  • 1.43e4
  • 1.47e4
  • 1.53e4
  • 1.56e4
  • 1.61e4
  • 1.61e4
  • 1.62e4
  • 1.64e4
  • 1.65e4
65.61
  • 65.61
  • 63.32
  • 59.08
  • 59.08
  • 58.32
  • 56.65
  • 52.05
  • 50.90
  • 48.84
  • 47.75
  • 46.14
  • 45.96
  • 45.91
  • 45.25
  • 44.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.29
  • 65.29
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.35
  • 64.35
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.46
  • 61.46
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
1.16e4
  • 1.16e4
  • 1.17e4
  • 1.59e4
61.19
  • 61.19
  • 60.94
  • 46.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.17e4
  • 1.17e4
  • 1.24e4
60.80
  • 60.80
  • 58.33
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
  • 1.57e4
60.29
  • 60.29
  • 47.47
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.27e4
  • 1.27e4
  • 1.46e4
57.40
  • 57.40
  • 51.18
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
  • 1.31e4
  • 1.40e4
  • 1.43e4
  • 1.53e4
  • 1.54e4
  • 1.60e4
56.24
  • 56.24
  • 55.98
  • 53.27
  • 52.09
  • 48.82
  • 48.33
  • 46.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.36e4
  • 1.36e4
54.46
  • 54.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.30
  • 54.30
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.41e4
  • 1.41e4
  • 1.55e4
  • 1.56e4
52.68
  • 52.68
  • 48.03
  • 47.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
  • 1.68e4
51.16
  • 51.16
  • 43.74
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.17
  • 50.17
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.18
  • 38.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species33 genesCompare expression
Bilateria20 species34 genesCompare expression

Orthology information comes from OMA : ENSDARG00000019392.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000019392.

Cross-references

EnsemblENSDARG00000019392 (stat5a)
ZFINZDB-GENE-030820-2 (stat5a)
EMBLAY501426, BC162592, CR388188
Uniprot/SPTREMBLF6NMQ4, F6NMQ4_DANRE, Q68SP3, Q68SP3_DANRE

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