D. rerio Gene: zgc:63470 - ENSDARG00000019406 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019406
Namezgc:63470
Descriptionzgc:63470 [Source:ZFIN;Acc:ZDB-GENE-040426-1126]
OrganismDanio rerio (zebrafish)
Synonym(s)q7sy57, zgc:103680, zgc:85731
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
957
  • 957
96.80
  • 96.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.29e3
  • 3.29e3
88.98
  • 88.98
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.43
  • 86.43
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
  • 9.93e3
85.77
  • 85.77
  • 66.77
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.91e3
  • 4.91e3
  • 5.72e3
  • 7.13e3
  • 1.10e4
  • 1.32e4
83.58
  • 83.58
  • 80.84
  • 76.11
  • 63.31
  • 55.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.94e3
  • 4.94e3
  • 7.35e3
83.48
  • 83.48
  • 75.38
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.18e3
  • 5.18e3
82.65
  • 82.65
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.13e3
  • 6.13e3
  • 8.20e3
79.49
  • 79.49
  • 72.56
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.80
  • 78.80
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.53
  • 77.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.18
  • 77.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.97e3
  • 6.97e3
76.67
  • 76.67
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.24
  • 76.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.80
  • 75.80
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.12
  • 74.12
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
73.97
  • 73.97
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
  • 1.44e4
71.53
  • 71.53
  • 51.72
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
8.54e3
  • 8.54e3
  • 9.67e3
71.40
  • 71.40
  • 67.63
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.80
  • 69.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.68e3
  • 9.68e3
67.58
  • 67.58
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
1.01e4
  • 1.01e4
  • 1.37e4
  • 1.47e4
  • 1.47e4
  • 1.49e4
66.12
  • 66.12
  • 54.25
  • 50.90
  • 50.68
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.75
  • 59.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.37
  • 58.37
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.39e4
  • 1.39e4
53.38
  • 53.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000019406 (zgc:63470)
ZFINZDB-GENE-040426-1126 (zgc:63470)
EMBLAY398392, BC055119, BC067593
Uniprot/SPTREMBLG1K2K0, G1K2K0_DANRE
Uniprot/SWISSPROTCK068_DANRE, Q6NWH0

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