D. rerio Gene: tmx1 - ENSDARG00000019487 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019487
Nametmx1
Descriptionthioredoxin-related transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2327]
OrganismDanio rerio (zebrafish)
Synonym(s)txndc, txndc1, wu:fc04g05

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.99e3
  • 2.99e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
4.06e3
  • 4.06e3
  • 6.61e3
  • 7.19e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.35e3
  • 5.35e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
5.49e3
  • 5.49e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
5.75e3
  • 5.75e3
  • 5.98e3
  • 7.68e3
  • 8.75e3
  • 8.89e3
  • 9.11e3
  • 9.17e3
  • 9.22e3
  • 9.25e3
  • 9.31e3
  • 9.41e3
  • 9.41e3
  • 9.55e3
  • 9.89e3
  • 1.45e4
  • 1.49e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.81e3
  • 5.81e3
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
6.07e3
  • 6.07e3
  • 8.04e3
  • 1.03e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
6.28e3
  • 6.28e3
  • 6.77e3
  • 7.82e3
  • 8.36e3
  • 8.75e3
  • 9.03e3
  • 9.13e3
  • 9.65e3
  • 1.08e4
  • 1.09e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.45e3
  • 6.45e3
  • 6.90e3
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.55e3
  • 6.55e3
  • 7.61e3
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.00e3
  • 7.00e3
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.18e3
  • 7.18e3
  • 9.93e3
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.61e3
  • 7.61e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.93e3
  • 7.93e3
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.27e3
  • 8.27e3
  • 9.69e3
  • 1.21e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.49e3
  • 8.49e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
8.65e3
  • 8.65e3
  • 9.07e3
  • 9.10e3
  • 1.03e4
  • 1.06e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.33e4
  • 1.33e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCU861445
EnsemblENSDARG00000019487 (tmx1)
Uniprot/SPTREMBLF1Q6B4, F1Q6B4_DANRE
ZFINZDB-GENE-030131-2327 (tmx1)

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