D. rerio Gene: cry5 - ENSDARG00000019498 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019498
Namecry5
Descriptioncryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
OrganismDanio rerio (zebrafish)
Synonym(s)6-4 photolyase, cry5/6-4phr, z6-4phr, z64phr

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.31e3
  • 8.31e3
  • 1.38e4
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.58e3
  • 8.58e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
9.08e3
  • 9.08e3
  • 9.46e3
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.41e3
  • 9.41e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.61e3
  • 9.61e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.61e3
  • 9.61e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
9.79e3
  • 9.79e3
  • 1.06e4
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.01e4
  • 1.01e4
  • 1.04e4
  • 1.26e4
  • 1.30e4
  • 1.45e4
  • 1.46e4
  • 1.46e4
  • 1.61e4
  • 1.76e4
  • 1.76e4
  • 1.77e4
  • 1.80e4
  • 1.82e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.09e4
  • 1.09e4
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.10e4
  • 1.10e4
  • 1.22e4
  • 1.39e4
  • 1.48e4
  • 1.49e4
  • 1.53e4
  • 1.61e4
  • 2.03e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000037Larval:Day 5
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.16e4
  • 1.16e4
  • 1.17e4
  • 1.21e4
  • 1.21e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000037Larval:Day 5
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.49e4
  • 1.49e4
  • 1.68e4
  • 1.70e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.50e4
  • 1.50e4
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.57e4
  • 1.57e4
  • 1.58e4
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU633782
EnsemblENSDARG00000019498 (cry5)
Uniprot/SPTREMBLF1QHM9, F1QHM9_DANRE
ZFINZDB-GENE-010426-8 (cry5)

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