D. rerio Gene: fads2 - ENSDARG00000019532 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019532
Namefads2
Descriptionfatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
OrganismDanio rerio (zebrafish)
Synonym(s)drd5/d6, fadsd6, wu:fb64c04, wu:fb69e08, zgc:112502
Orthologs(s)3 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
102
  • 102
  • 1.12e4
99.66
  • 99.66
  • 62.48
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
309
  • 309
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
460
  • 460
  • 829
  • 8.29e3
  • 8.68e3
  • 1.68e4
  • 1.79e4
  • 1.80e4
98.46
  • 98.46
  • 97.23
  • 72.24
  • 70.94
  • 43.58
  • 40.18
  • 39.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
835
  • 835
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
864
  • 864
  • 1.56e4
97.11
  • 97.11
  • 47.63
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.42
  • 96.42
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.24e3
  • 1.24e3
  • 8.37e3
  • 1.12e4
95.84
  • 95.84
  • 71.97
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
95.82
  • 95.82
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.49e3
  • 2.49e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.37
  • 87.37
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
4.93e3
  • 4.93e3
  • 1.58e4
  • 1.64e4
  • 1.65e4
  • 1.72e4
83.49
  • 83.49
  • 47.14
  • 45.11
  • 44.67
  • 42.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
79.01
  • 79.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.81
  • 74.81
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.58e3
  • 7.58e3
  • 9.33e3
  • 1.13e4
74.63
  • 74.63
  • 68.75
  • 62.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.10e3
  • 8.10e3
72.89
  • 72.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.08e4
  • 1.08e4
  • 1.58e4
63.85
  • 63.85
  • 46.96
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.11
  • 63.11
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.21e4
  • 1.21e4
  • 1.24e4
  • 1.30e4
  • 1.47e4
59.54
  • 59.54
  • 58.46
  • 56.49
  • 50.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.23
  • 56.23
AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
  • 1.42e4
  • 1.42e4
54.97
  • 54.97
  • 52.60
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.35e4
  • 1.35e4
  • 1.41e4
  • 1.41e4
  • 1.42e4
  • 1.42e4
54.73
  • 54.73
  • 52.75
  • 52.75
  • 52.60
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.41e4
  • 1.41e4
  • 1.41e4
  • 1.41e4
52.92
  • 52.92
  • 52.92
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.03
  • 50.03
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.09
  • 45.09
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.00
  • 43.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.84e4
  • 1.84e4
38.38
  • 38.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi3 species3 genesCompare expression

Orthology information comes from OMA : ENSDARG00000019532.

Cross-references

EnsemblENSDARG00000019532 (fads2)
ZFINZDB-GENE-011212-1 (fads2)
EMBLBC155076, CU694371
Uniprot/SPTREMBLA8E549, A8E549_DANRE, A9JSU3, A9JSU3_DANRE, F1R3G9, F1R3G9_DANRE

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