D. rerio Gene: neurod1 - ENSDARG00000019566 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019566
Nameneurod1
Descriptionneuronal differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-990415-172]
OrganismDanio rerio (zebrafish)
Synonym(s)beta2/neurod, etid309883.9, ndf1, neuro-d, neurod, neurod,gn nrd, nrd
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
106
  • 106
  • 244
  • 337
  • 1.06e3
  • 3.98e3
  • 1.17e4
  • 1.34e4
99.65
  • 99.65
  • 99.19
  • 98.88
  • 96.44
  • 86.66
  • 60.84
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
302
  • 302
  • 2.71e3
98.99
  • 98.99
  • 90.92
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:0000104life cycle
416
  • 416
  • 4.07e3
  • 5.34e3
  • 6.79e3
  • 7.47e3
  • 1.31e4
  • 1.33e4
98.61
  • 98.61
  • 86.36
  • 82.14
  • 77.27
  • 74.99
  • 56.24
  • 55.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
641
  • 641
97.86
  • 97.86
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
765
  • 765
  • 1.83e3
  • 2.43e3
  • 2.86e3
  • 4.73e3
  • 8.15e3
  • 8.99e3
  • 1.24e4
  • 1.25e4
  • 1.32e4
  • 1.44e4
  • 1.45e4
97.44
  • 97.44
  • 93.88
  • 91.88
  • 90.44
  • 84.16
  • 72.71
  • 69.90
  • 58.49
  • 58.30
  • 55.90
  • 51.74
  • 51.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
800
  • 800
  • 974
  • 4.62e3
  • 5.56e3
  • 6.65e3
  • 7.01e3
  • 7.31e3
  • 1.04e4
  • 1.12e4
  • 1.21e4
97.33
  • 97.33
  • 96.74
  • 84.54
  • 81.40
  • 77.72
  • 76.54
  • 75.52
  • 65.32
  • 62.43
  • 59.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.62e3
  • 1.62e3
  • 2.21e3
  • 2.71e3
94.57
  • 94.57
  • 92.59
  • 90.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002827vestibulocochlear ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
2.99e3
  • 2.99e3
  • 4.98e3
  • 4.98e3
  • 4.98e3
  • 1.49e4
  • 1.49e4
90.00
  • 90.00
  • 83.34
  • 83.34
  • 83.34
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.49e3
  • 3.49e3
  • 1.27e4
  • 1.29e4
88.32
  • 88.32
  • 57.47
  • 56.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003921pancreas primordium
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
3.73e3
  • 3.73e3
  • 6.64e3
  • 8.04e3
87.50
  • 87.50
  • 77.77
  • 73.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
3.98e3
  • 3.98e3
  • 6.64e3
  • 7.47e3
  • 7.97e3
  • 7.97e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.96e3
  • 1.25e4
  • 1.27e4
86.66
  • 86.66
  • 77.77
  • 74.99
  • 73.32
  • 73.32
  • 71.41
  • 70.82
  • 70.57
  • 69.99
  • 69.43
  • 66.67
  • 58.31
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000036Larval:Day 4
4.27e3
  • 4.27e3
  • 4.98e3
  • 7.47e3
  • 7.47e3
85.71
  • 85.71
  • 83.33
  • 75.00
  • 75.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
4.48e3
  • 4.48e3
  • 1.07e4
  • 1.28e4
  • 1.42e4
84.99
  • 84.99
  • 64.27
  • 57.11
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001314posterior lateral line ganglion
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
4.98e3
  • 4.98e3
  • 4.98e3
  • 9.96e3
  • 1.49e4
83.34
  • 83.34
  • 83.34
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
4.98e3
  • 4.98e3
  • 1.28e4
  • 1.49e4
83.34
  • 83.34
  • 57.13
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001156posterior lateral line placode
  • ZFS:0000026Segmentation:14-19 somites
4.98e3
  • 4.98e3
83.34
  • 83.34
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
6.40e3
  • 6.40e3
  • 7.08e3
  • 9.13e3
  • 1.06e4
  • 1.34e4
  • 1.42e4
78.57
  • 78.57
  • 76.30
  • 69.43
  • 64.56
  • 55.24
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000573retinal cone cell
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0001700geniculate ganglion
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003249epithelium of otic placode
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0005362vagus X ganglion
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0009124geniculate placode
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2001302vagal ganglion 1
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001303vagal ganglion 2
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001304vagal ganglion 3
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001305vagal ganglion 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001313ventral anterior lateral line ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 7.47e3
75.00
  • 75.00
  • 75.00
AEIR
  • AEIR
  • AEIR
CL:0000604retinal rod cell
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000016endocrine pancreas
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001016nervous system
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
7.47e3
  • 7.47e3
  • 8.96e3
75.00
  • 75.00
  • 70.00
AEIR
  • AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 9.96e3
75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:2007034forebrain neural rod
  • ZFS:0000024Segmentation:5-9 somites
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
8.15e3
  • 8.15e3
  • 1.24e4
  • 1.28e4
  • 1.33e4
72.72
  • 72.72
  • 58.32
  • 57.14
  • 55.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
8.53e3
  • 8.53e3
  • 9.44e3
  • 1.08e4
  • 1.35e4
  • 1.39e4
  • 1.39e4
71.43
  • 71.43
  • 68.40
  • 63.87
  • 54.73
  • 53.55
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.65e3
  • 8.65e3
  • 1.41e4
  • 1.41e4
  • 1.41e4
71.04
  • 71.04
  • 52.92
  • 52.75
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
8.71e3
  • 8.71e3
  • 9.60e3
  • 9.96e3
  • 1.39e4
70.82
  • 70.82
  • 67.85
  • 66.66
  • 53.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
8.96e3
  • 8.96e3
  • 9.67e3
  • 1.29e4
69.99
  • 69.99
  • 67.63
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000035Larval:Protruding-mouth
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000036Larval:Day 4
9.51e3
  • 9.51e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
68.17
  • 68.17
  • 66.66
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
9.51e3
  • 9.51e3
  • 1.09e4
  • 1.16e4
  • 1.18e4
  • 1.33e4
68.17
  • 68.17
  • 63.61
  • 61.09
  • 60.39
  • 55.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000561amacrine cell
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 1.49e4
66.67
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 1.15e4
  • 1.40e4
66.67
  • 66.67
  • 61.34
  • 53.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001701glossopharyngeal ganglion
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
ZFA:0005754primary islet (Danio)
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0015238pineal complex
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:2000068proneural cluster
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.06e4
  • 1.06e4
64.62
  • 64.62
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.07e4
  • 1.07e4
  • 1.49e4
64.27
  • 64.27
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.07e4
  • 1.07e4
64.08
  • 64.08
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.10e4
  • 1.10e4
  • 1.39e4
63.32
  • 63.32
  • 53.55
AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
1.14e4
  • 1.14e4
  • 1.39e4
  • 1.42e4
61.88
  • 61.88
  • 53.31
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.16e4
  • 1.16e4
  • 1.49e4
  • 1.49e4
61.10
  • 61.10
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003923dorsal pancreatic bud
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0005425presumptive neural retina
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000031Pharyngula:Prim-25
1.32e4
  • 1.32e4
55.86
  • 55.86
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
55.48
  • 55.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.70
  • 52.70
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.45
  • 50.45
AEIR
  • AEIR
CL:0000120granule cell
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000163endocrine cell
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000210photoreceptor cell
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000223endodermal cell
  • ZFS:0000024Segmentation:5-9 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000710neurecto-epithelial cell
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0001031cerebellar granule cell
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001316anterior lateral line placode
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005725olfactory system
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000940posterior lateral line neuromast
  • ZFS:0000032Pharyngula:High-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001483middle lateral line ganglion
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000100motor neuron
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000044dorsal root ganglion
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003065ciliary marginal zone
  • ZFS:0000043Juvenile:Days 45-89
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005346extrapancreatic duct
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001312dorsal anterior lateral line ganglion
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000247Rohon-Beard neuron
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000023Segmentation:1-4 somites
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0009610forebrain neural plate
  • ZFS:0000022Gastrula:Bud
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2007043hindbrain neural tube
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
  • 1.49e4
49.99
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.98
  • 49.98
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
  • 2.33e4
49.07
  • 49.07
  • 21.83
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.29
  • 35.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.81
  • 33.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.55
  • 29.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000019566 (neurod1)
ZFINZDB-GENE-990415-172 (neurod1)
EMBLAF017302, AF036148, BC056603, BC066437
Uniprot/SPTREMBLI6L9F5, I6L9F5_DANRE
Uniprot/SWISSPROTNDF1_DANRE, O42202

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